MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:53560499-53620685

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
A430108G06Rik	11	53564688 to 53567313	2625	-	lncRNA gene	RIKEN cDNA A430108G06 gene
Cpgi2871	11	53567144 to 53568013	869		CpG island	CpG island 2871
Tssr101415	11	53567361 to 53567428	67	+	TSS region	transcription start site region 101415
Kif3a	11	53567379 to 53601967	34588	+	protein coding gene	kinesin family member 3A
Tssr101416	11	53582220 to 53582226	6	+	TSS region	transcription start site region 101416
Tssr101417	11	53583894 to 53583906	12	+	TSS region	transcription start site region 101417
Tssr101418	11	53583920 to 53583934	14	+	TSS region	transcription start site region 101418
Tssr101419	11	53583962 to 53583973	11	+	TSS region	transcription start site region 101419
Tssr101420	11	53584373 to 53584393	20	+	TSS region	transcription start site region 101420
Tssr101421	11	53586831 to 53586843	12	+	TSS region	transcription start site region 101421
Tssr107934	11	53586905 to 53586925	20	-	TSS region	transcription start site region 107934
Cpgi2872	11	53590499 to 53590685	186		CpG island	CpG island 2872
Il4	11	53612460 to 53618665	6205	-	protein coding gene	interleukin 4
Lbw8	11	53612460 to 53618665	6205		QTL	lupus NZB x NZW 8
Tssr107935	11	53617275 to 53617295	20	-	TSS region	transcription start site region 107935
Tssr107936	11	53617333 to 53617366	33	-	TSS region	transcription start site region 107936
D11Mit111	11	53618045 to 53618173	128		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 111
Tssr107937	11	53618659 to 53618668	9	-	TSS region	transcription start site region 107937