Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:52384218-52754219

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vdac1 11 52360862 to 52389397 28535 + protein coding gene voltage-dependent anion channel 1
Tssr101360 11 52389139 to 52389146 7 + TSS region transcription start site region 101360
Tssr107895 11 52390049 to 52390082 33 - TSS region transcription start site region 107895
Cpgi2856 11 52396267 to 52397167 900 CpG island CpG island 2856
Tssr101361 11 52396390 to 52396395 5 + TSS region transcription start site region 101361
Tssr101362 11 52396414 to 52396449 35 + TSS region transcription start site region 101362
9530068E07Rik 11 52396428 to 52408723 12295 + protein coding gene RIKEN cDNA 9530068E07 gene
Tssr101363 11 52396451 to 52396473 22 + TSS region transcription start site region 101363
Tssr101364 11 52396482 to 52396494 12 + TSS region transcription start site region 101364
Tssr101365 11 52396540 to 52396543 3 + TSS region transcription start site region 101365
Tssr101366 11 52396585 to 52396601 16 + TSS region transcription start site region 101366
Tssr101367 11 52402911 to 52402932 21 + TSS region transcription start site region 101367
Tssr107896 11 52403368 to 52403390 22 - TSS region transcription start site region 107896
Tssr101368 11 52403441 to 52403481 40 + TSS region transcription start site region 101368
Tssr101369 11 52405255 to 52405262 7 + TSS region transcription start site region 101369
Gm12208 11 52405316 to 52405478 162 + pseudogene predicted gene 12208
Tssr101370 11 52407171 to 52407185 14 + TSS region transcription start site region 101370
Tssr101371 11 52407402 to 52407454 52 + TSS region transcription start site region 101371
Gm12209 11 52478508 to 52479103 595 - pseudogene predicted gene 12209
Cpgi2857 11 52480784 to 52481066 282 CpG island CpG island 2857
Tssr107897 11 52480916 to 52480923 7 - TSS region transcription start site region 107897
Gm12210 11 52487158 to 52487310 152 - pseudogene predicted gene 12210
Tssr101372 11 52569218 to 52569219 1 + TSS region transcription start site region 101372
Gm30366 11 52579322 to 52663853 84531 + lncRNA gene predicted gene, 30366
Gm39823 11 52705779 to 52707045 1266 + lncRNA gene predicted gene, 39823