Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:52313441-52493481

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30217 11 52307118 to 52318720 11602 + lncRNA gene predicted gene, 30217
Cpgi2854 11 52314166 to 52314444 278 CpG island CpG island 2854
Tssr101353 11 52318759 to 52318770 11 + TSS region transcription start site region 101353
Tssr107891 11 52332557 to 52332568 11 - TSS region transcription start site region 107891
Tssr107892 11 52336079 to 52336094 15 - TSS region transcription start site region 107892
Tssr101354 11 52336258 to 52336267 9 + TSS region transcription start site region 101354
Tssr101355 11 52339763 to 52339772 9 + TSS region transcription start site region 101355
D11Mit87 11 52343766 to 52343904 138 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 87
Cpgi2855 11 52360329 to 52361961 1632 CpG island CpG island 2855
Tssr101356 11 52360824 to 52360935 111 + TSS region transcription start site region 101356
Vdac1 11 52360862 to 52389397 28535 + protein coding gene voltage-dependent anion channel 1
Tssr107893 11 52360939 to 52360955 16 - TSS region transcription start site region 107893
Tssr107894 11 52360963 to 52361013 50 - TSS region transcription start site region 107894
Tssr101357 11 52361049 to 52361064 15 + TSS region transcription start site region 101357
Tssr101358 11 52361069 to 52361126 57 + TSS region transcription start site region 101358
Tssr101359 11 52374294 to 52374320 26 + TSS region transcription start site region 101359
Tssr101360 11 52389139 to 52389146 7 + TSS region transcription start site region 101360
Tssr107895 11 52390049 to 52390082 33 - TSS region transcription start site region 107895
Cpgi2856 11 52396267 to 52397167 900 CpG island CpG island 2856
Tssr101361 11 52396390 to 52396395 5 + TSS region transcription start site region 101361
Tssr101362 11 52396414 to 52396449 35 + TSS region transcription start site region 101362
9530068E07Rik 11 52396428 to 52408723 12295 + protein coding gene RIKEN cDNA 9530068E07 gene
Tssr101363 11 52396451 to 52396473 22 + TSS region transcription start site region 101363
Tssr101364 11 52396482 to 52396494 12 + TSS region transcription start site region 101364
Tssr101365 11 52396540 to 52396543 3 + TSS region transcription start site region 101365
Tssr101366 11 52396585 to 52396601 16 + TSS region transcription start site region 101366
Tssr101367 11 52402911 to 52402932 21 + TSS region transcription start site region 101367
Tssr107896 11 52403368 to 52403390 22 - TSS region transcription start site region 107896
Tssr101368 11 52403441 to 52403481 40 + TSS region transcription start site region 101368
Tssr101369 11 52405255 to 52405262 7 + TSS region transcription start site region 101369
Gm12208 11 52405316 to 52405478 162 + pseudogene predicted gene 12208
Tssr101370 11 52407171 to 52407185 14 + TSS region transcription start site region 101370
Tssr101371 11 52407402 to 52407454 52 + TSS region transcription start site region 101371
Gm12209 11 52478508 to 52479103 595 - pseudogene predicted gene 12209
Cpgi2857 11 52480784 to 52481066 282 CpG island CpG island 2857
Tssr107897 11 52480916 to 52480923 7 - TSS region transcription start site region 107897
Gm12210 11 52487158 to 52487310 152 - pseudogene predicted gene 12210