MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:52112144-52223440

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ppp2ca	11	52098824 to 52122749	23925	+	protein coding gene	protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform
Gm30631	11	52116311 to 52117008	697	-	pseudogene	predicted gene, 30631
Tssr101312	11	52117997 to 52118010	13	+	TSS region	transcription start site region 101312
Tssr101313	11	52120914 to 52120921	7	+	TSS region	transcription start site region 101313
Tssr107847	11	52120960 to 52120975	15	-	TSS region	transcription start site region 107847
Tssr101314	11	52121902 to 52121957	55	+	TSS region	transcription start site region 101314
Tssr101315	11	52122263 to 52122279	16	+	TSS region	transcription start site region 101315
Tssr101316	11	52122417 to 52122432	15	+	TSS region	transcription start site region 101316
9430098F02Rik	11	52124530 to 52127779	3249	-	lincRNA gene	RIKEN cDNA 9430098F02 gene
Mir3061	11	52126746 to 52126836	90	+	miRNA gene	microRNA 3061
Olfr1373	11	52144593 to 52145528	935	-	protein coding gene	olfactory receptor 1373
Olfr1372-ps1	11	52154876 to 52157907	3031	-	pseudogene	olfactory receptor 1372, pseudogene 1
Cpgi2849	11	52167144 to 52168440	1296		CpG island	CpG island 2849
Tssr107848	11	52168117 to 52168137	20	-	TSS region	transcription start site region 107848
Cpgi2850	11	52187096 to 52187418	322		CpG island	CpG island 2850
Gm12206	11	52188953 to 52189553	600	+	pseudogene	predicted gene 12206
Olfr1371	11	52213052 to 52213987	935	-	protein coding gene	olfactory receptor 1371