MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:51900086-52000122

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm39822	11	51898966 to 51909624	10658	+	lincRNA gene	predicted gene, 39822
Tssr101297	11	51915661 to 51915664	3	+	TSS region	transcription start site region 101297
Tssr101298	11	51915766 to 51915774	8	+	TSS region	transcription start site region 101298
Tssr101299	11	51916906 to 51916919	13	+	TSS region	transcription start site region 101299
Tssr107835	11	51931855 to 51931870	15	-	TSS region	transcription start site region 107835
Gm26551	11	51949882 to 52269514	319632	-	lincRNA gene	predicted gene, 26551
Tssr107836	11	51950086 to 51950122	36	-	TSS region	transcription start site region 107836
Tssr101300	11	51961345 to 51961352	7	+	TSS region	transcription start site region 101300
Gm26061	11	51964382 to 51964489	107	+	snRNA gene	predicted gene, 26061
Cpgi2845	11	51967228 to 51968297	1069		CpG island	CpG island 2845
Tssr101301	11	51967649 to 51967709	60	+	TSS region	transcription start site region 101301
Cdkn2aipnl	11	51967661 to 51977334	9673	+	protein coding gene	CDKN2A interacting protein N-terminal like
n-TAagc1	11	51976539 to 51976610	71	+	tRNA gene	nuclear encoded tRNA alanine 1 (anticodon AGC)
Ube2b	11	51985497 to 52000762	15265	-	protein coding gene	ubiquitin-conjugating enzyme E2B
5430406J06Rik	11	51993571 to 51994503	932		unclassified gene	RIKEN cDNA 5430406J06 gene
Tssr107837	11	51997847 to 51997878	31	-	TSS region	transcription start site region 107837
Tssr107838	11	51998897 to 51998903	6	-	TSS region	transcription start site region 107838
Cpgi2846	11	51999731 to 52000944	1213		CpG island	CpG island 2846