MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:50120250-50200254

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm12194	11	50126907 to 50127918	1011	-	pseudogene	predicted gene 12194
Tssr107709	11	50128131 to 50128140	9	-	TSS region	transcription start site region 107709
Cpgi2804	11	50130919 to 50131928	1009		CpG island	CpG island 2804
Tssr101213	11	50131013 to 50131051	38	+	TSS region	transcription start site region 101213
Tssr101214	11	50131317 to 50131335	18	+	TSS region	transcription start site region 101214
Tssr101215	11	50131342 to 50131426	84	+	TSS region	transcription start site region 101215
Tbc1d9b	11	50131396 to 50172785	41389	+	protein coding gene	TBC1 domain family, member 9B
Tssr3486	11	50131428 to 50131446	18	+	TSS region	transcription start site region 3486
Tssr101216	11	50132002 to 50132029	27	+	TSS region	transcription start site region 101216
Gm12195	11	50134082 to 50135004	922	-	antisense lncRNA gene	predicted gene 12195
Tssr101217	11	50134399 to 50134421	22	+	TSS region	transcription start site region 101217
Tssr107710	11	50139726 to 50139744	18	-	TSS region	transcription start site region 107710
Tssr101218	11	50147915 to 50147917	2	+	TSS region	transcription start site region 101218
Tssr101219	11	50160250 to 50160254	4	+	TSS region	transcription start site region 101219
Cpgi2805	11	50174413 to 50175089	676		CpG island	CpG island 2805
Tssr101220	11	50174839 to 50174884	45	+	TSS region	transcription start site region 101220
Mrnip	11	50174851 to 50200116	25265	+	protein coding gene	MRN complex interacting protein
Sqstm1	11	50200152 to 50210820	10668	-	protein coding gene	sequestosome 1