Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:49238853-49649788

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2793 11 49243603 to 49244534 931 CpG island CpG island 2793
Tssr107700 11 49243878 to 49243894 16 - TSS region transcription start site region 107700
Tssr107701 11 49244153 to 49244169 16 - TSS region transcription start site region 107701
Mgat1 11 49244191 to 49263027 18836 + protein coding gene mannoside acetylglucosaminyltransferase 1
Tssr101180 11 49244227 to 49244283 56 + TSS region transcription start site region 101180
Tssr101181 11 49245458 to 49245506 48 + TSS region transcription start site region 101181
Tssr101182 11 49245524 to 49245539 15 + TSS region transcription start site region 101182
Tssr101183 11 49247462 to 49247512 50 + TSS region transcription start site region 101183
Tssr101184 11 49250097 to 49250115 18 + TSS region transcription start site region 101184
Cpgi2794 11 49250359 to 49250999 640 CpG island CpG island 2794
Tssr101185 11 49250542 to 49250572 30 + TSS region transcription start site region 101185
Tssr101186 11 49250583 to 49250597 14 + TSS region transcription start site region 101186
Tssr101187 11 49259040 to 49259051 11 + TSS region transcription start site region 101187
Gm46279 11 49263918 to 49269186 5268 + lncRNA gene predicted gene, 46279
Olfr1393 11 49278304 to 49282769 4465 + protein coding gene olfactory receptor 1393
Olfr1392 11 49293297 to 49294322 1025 + protein coding gene olfactory receptor 1392
D11Mit138 11 49294478 to 49294619 141 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 138
Olfr10 11 49317548 to 49318483 935 + protein coding gene olfactory receptor 10
Olfr1391 11 49327413 to 49328348 935 + protein coding gene olfactory receptor 1391
Olfr1390 11 49340534 to 49341469 935 + protein coding gene olfactory receptor 1390
Gm12189 11 49404620 to 49405531 911 + pseudogene predicted gene 12189
Olfr1389 11 49430427 to 49431499 1072 + protein coding gene olfactory receptor 1389
Olfr1388 11 49443853 to 49444788 935 + protein coding gene olfactory receptor 1388
Olfr1387 11 49459681 to 49460616 935 + protein coding gene olfactory receptor 1387
Olfr1386 11 49470054 to 49471181 1127 + protein coding gene olfactory receptor 1386
Olfr1385 11 49494535 to 49495464 929 + protein coding gene olfactory receptor 1385
Olfr1384 11 49513618 to 49514651 1033 + protein coding gene olfactory receptor 1384
Olfr1383 11 49523725 to 49524660 935 + protein coding gene olfactory receptor 1383
Olfr1382 11 49535187 to 49536122 935 + protein coding gene olfactory receptor 1382
Olfr1381 11 49551749 to 49552684 935 + protein coding gene olfactory receptor 1381
Olfr1380 11 49563923 to 49564858 935 + protein coding gene olfactory receptor 1380
1700024J04Rik 11 49586641 to 49588462 1821 - pseudogene RIKEN cDNA 1700024J04 gene
Cpgi2795 11 49590050 to 49590464 414 CpG island CpG island 2795
Gm39480 11 49590164 to 49592848 2684 + lncRNA gene predicted gene, 39480
Tssr107702 11 49590326 to 49590350 24 - TSS region transcription start site region 107702
Gm42075 11 49593909 to 49598779 4870 - lncRNA gene predicted gene, 42075
Gm12190 11 49595739 to 49595925 186 - pseudogene predicted gene 12190
Cpgi2796 11 49609328 to 49610429 1101 CpG island CpG island 2796
Flt4 11 49609679 to 49652739 43060 + protein coding gene FMS-like tyrosine kinase 4
Tssr101188 11 49609697 to 49609728 31 + TSS region transcription start site region 101188
Cpgi2797 11 49633933 to 49635175 1242 CpG island CpG island 2797
Cpgi2798 11 49636615 to 49637324 709 CpG island CpG island 2798