Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:49228853-49659788

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2793 11 49243603 to 49244534 931 CpG island CpG island 2793
Tssr107700 11 49243878 to 49243894 16 - TSS region transcription start site region 107700
Tssr107701 11 49244153 to 49244169 16 - TSS region transcription start site region 107701
Mgat1 11 49244191 to 49263027 18836 + protein coding gene mannoside acetylglucosaminyltransferase 1
Tssr101180 11 49244227 to 49244283 56 + TSS region transcription start site region 101180
Tssr101181 11 49245458 to 49245506 48 + TSS region transcription start site region 101181
Tssr101182 11 49245524 to 49245539 15 + TSS region transcription start site region 101182
Tssr101183 11 49247462 to 49247512 50 + TSS region transcription start site region 101183
Tssr101184 11 49250097 to 49250115 18 + TSS region transcription start site region 101184
Cpgi2794 11 49250359 to 49250999 640 CpG island CpG island 2794
Tssr101185 11 49250542 to 49250572 30 + TSS region transcription start site region 101185
Tssr101186 11 49250583 to 49250597 14 + TSS region transcription start site region 101186
Tssr101187 11 49259040 to 49259051 11 + TSS region transcription start site region 101187
Gm46279 11 49263918 to 49269186 5268 + lncRNA gene predicted gene, 46279
Olfr1393 11 49278304 to 49282769 4465 + protein coding gene olfactory receptor 1393
Olfr1392 11 49293297 to 49294322 1025 + protein coding gene olfactory receptor 1392
D11Mit138 11 49294478 to 49294619 141 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 138
Olfr10 11 49317548 to 49318483 935 + protein coding gene olfactory receptor 10
Olfr1391 11 49327413 to 49328348 935 + protein coding gene olfactory receptor 1391
Olfr1390 11 49340534 to 49341469 935 + protein coding gene olfactory receptor 1390
Gm12189 11 49404620 to 49405531 911 + pseudogene predicted gene 12189
Olfr1389 11 49430427 to 49431499 1072 + protein coding gene olfactory receptor 1389
Olfr1388 11 49443853 to 49444788 935 + protein coding gene olfactory receptor 1388
Olfr1387 11 49459681 to 49460616 935 + protein coding gene olfactory receptor 1387
Olfr1386 11 49470054 to 49471181 1127 + protein coding gene olfactory receptor 1386
Olfr1385 11 49494535 to 49495464 929 + protein coding gene olfactory receptor 1385
Olfr1384 11 49513618 to 49514651 1033 + protein coding gene olfactory receptor 1384
Olfr1383 11 49523725 to 49524660 935 + protein coding gene olfactory receptor 1383
Olfr1382 11 49535187 to 49536122 935 + protein coding gene olfactory receptor 1382
Olfr1381 11 49551749 to 49552684 935 + protein coding gene olfactory receptor 1381
Olfr1380 11 49563923 to 49564858 935 + protein coding gene olfactory receptor 1380
1700024J04Rik 11 49586641 to 49588462 1821 - pseudogene RIKEN cDNA 1700024J04 gene
Cpgi2795 11 49590050 to 49590464 414 CpG island CpG island 2795
Gm39480 11 49590164 to 49592848 2684 + lncRNA gene predicted gene, 39480
Tssr107702 11 49590326 to 49590350 24 - TSS region transcription start site region 107702
Gm42075 11 49593909 to 49598779 4870 - lncRNA gene predicted gene, 42075
Gm12190 11 49595739 to 49595925 186 - pseudogene predicted gene 12190
Cpgi2796 11 49609328 to 49610429 1101 CpG island CpG island 2796
Flt4 11 49609679 to 49652739 43060 + protein coding gene FMS-like tyrosine kinase 4
Tssr101188 11 49609697 to 49609728 31 + TSS region transcription start site region 101188
Cpgi2797 11 49633933 to 49635175 1242 CpG island CpG island 2797
Cpgi2798 11 49636615 to 49637324 709 CpG island CpG island 2798
Tssr101189 11 49651774 to 49651778 4 + TSS region transcription start site region 101189