Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:14097422-16807551

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930554G24Rik 11 14072103 to 14179041 106938 - lincRNA gene RIKEN cDNA 4930554G24 gene
Tssr106932 11 14120419 to 14120425 6 - TSS region transcription start site region 106932
Tssr106933 11 14147704 to 14147712 8 - TSS region transcription start site region 106933
Tssr100397 11 14162055 to 14162066 11 + TSS region transcription start site region 100397
Gm12005 11 14162079 to 14162457 378 + pseudogene predicted gene 12005
Tssr106934 11 14179040 to 14179081 41 - TSS region transcription start site region 106934
Tssr100398 11 14186129 to 14186133 4 + TSS region transcription start site region 100398
Tssr106935 11 14448655 to 14448659 4 - TSS region transcription start site region 106935
Gm12006 11 14487613 to 14488015 402 + pseudogene predicted gene 12006
1700046C09Rik 11 14560355 to 14599225 38870 - lincRNA gene RIKEN cDNA 1700046C09 gene
Tssr106936 11 14599194 to 14599207 13 - TSS region transcription start site region 106936
Tssr100399 11 14599240 to 14599243 3 + TSS region transcription start site region 100399
Tssr100400 11 14599252 to 14599296 44 + TSS region transcription start site region 100400
Pom121l12 11 14599276 to 14600314 1038 + protein coding gene POM121 membrane glycoprotein-like 12
Tssr3431 11 14703490 to 14703492 2 + TSS region transcription start site region 3431
Gm12007 11 14722617 to 14723213 596 + pseudogene predicted gene 12007
Gm12008 11 14780027 to 14780781 754 + pseudogene predicted gene 12008
D11Mit148 11 14802448 to 14802592 144 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 148
Gm12009 11 15049158 to 15050257 1099 + pseudogene predicted gene 12009
Gm24707 11 15412300 to 15412406 106 + snRNA gene predicted gene, 24707
Gm25490 11 15452422 to 15452551 129 + snoRNA gene predicted gene, 25490
Gm12010 11 15482327 to 15489453 7126 + pseudogene predicted gene 12010
Gm37319 11 16037793 to 16038428 635 + unclassified gene predicted gene, 37319
Gm12011 11 16236929 to 16237546 617 + pseudogene predicted gene 12011
Cpgi2589 11 16257160 to 16258100 940 CpG island CpG island 2589
Vstm2a 11 16257357 to 16284551 27194 + protein coding gene V-set and transmembrane domain containing 2A
Tssr100401 11 16257634 to 16257649 15 + TSS region transcription start site region 100401
Tssr100402 11 16257659 to 16257672 13 + TSS region transcription start site region 100402
Tssr100403 11 16257706 to 16257808 102 + TSS region transcription start site region 100403
Tssr100404 11 16257867 to 16257878 11 + TSS region transcription start site region 100404
Tssr100405 11 16260585 to 16260607 22 + TSS region transcription start site region 100405
Cpgi2590 11 16260669 to 16261470 801 CpG island CpG island 2590
Gm12012 11 16439254 to 16440319 1065 + pseudogene predicted gene 12012
Sec61g 11 16501638 to 16508484 6846 - protein coding gene SEC61, gamma subunit
Cpgi2591 11 16507759 to 16508568 809 CpG island CpG island 2591
Tssr106937 11 16508098 to 16508139 41 - TSS region transcription start site region 106937
Tssr106938 11 16508149 to 16508187 38 - TSS region transcription start site region 106938
Tssr106939 11 16508487 to 16508507 20 - TSS region transcription start site region 106939
Akt2-ps 11 16514533 to 16515981 1448 + pseudogene thymoma viral proto-oncogene 2, pseudogene
Tssr100406 11 16526107 to 16526113 6 + TSS region transcription start site region 100406
Tssr106940 11 16591511 to 16591530 19 - TSS region transcription start site region 106940
Tssr106941 11 16591668 to 16591674 6 - TSS region transcription start site region 106941
Tssr106942 11 16592894 to 16592897 3 - TSS region transcription start site region 106942
Gm12663 11 16635109 to 16636066 957 - pseudogene predicted gene 12663
Tssr106943 11 16636128 to 16636141 13 - TSS region transcription start site region 106943
Gm12664 11 16643009 to 16643921 912 - pseudogene predicted gene 12664
Gm24714 11 16645438 to 16645538 100 - miRNA gene predicted gene, 24714
D11Mit75 11 16648403 to 16648528 125 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 75
Gm39583 11 16687946 to 16742258 54312 - lncRNA gene predicted gene, 39583
Gm25698 11 16732605 to 16732711 106 - snRNA gene predicted gene, 25698
Tssr106944 11 16742244 to 16742280 36 - TSS region transcription start site region 106944
Cpgi2592 11 16751955 to 16753433 1478 CpG island CpG island 2592
Tssr3432 11 16752197 to 16752202 5 + TSS region transcription start site region 3432
Egfr 11 16752203 to 16913907 161704 + protein coding gene epidermal growth factor receptor
Tssr100407 11 16752203 to 16752215 12 + TSS region transcription start site region 100407
Tssr100408 11 16752220 to 16752236 16 + TSS region transcription start site region 100408
Tssr100409 11 16752245 to 16752265 20 + TSS region transcription start site region 100409
Tssr100410 11 16753320 to 16753333 13 + TSS region transcription start site region 100410
Tssr100411 11 16758911 to 16758916 5 + TSS region transcription start site region 100411
Tssr100412 11 16759513 to 16759524 11 + TSS region transcription start site region 100412
Tssr100413 11 16759586 to 16759610 24 + TSS region transcription start site region 100413
Tssr100414 11 16759613 to 16759639 26 + TSS region transcription start site region 100414
Tssr100415 11 16778000 to 16778033 33 + TSS region transcription start site region 100415
Tssr100416 11 16778146 to 16778148 2 + TSS region transcription start site region 100416
Tssr100417 11 16778600 to 16778612 12 + TSS region transcription start site region 100417
Tssr100418 11 16778653 to 16778692 39 + TSS region transcription start site region 100418
Tssr106945 11 16779551 to 16779561 10 - TSS region transcription start site region 106945
Gm39584 11 16782393 to 16793633 11240 - lncRNA gene predicted gene, 39584
Tssr100419 11 16786077 to 16786086 9 + TSS region transcription start site region 100419
Tssr106946 11 16791301 to 16791319 18 - TSS region transcription start site region 106946
Tssr100420 11 16804413 to 16804424 11 + TSS region transcription start site region 100420
Tssr100421 11 16805637 to 16805647 10 + TSS region transcription start site region 100421