Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:121235509-121425710

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4341 11 121236482 to 121237602 1120 CpG island CpG island 4341
Tssr106395 11 121237216 to 121237289 73 + TSS region transcription start site region 106395
Narf 11 121237253 to 121255856 18603 + protein coding gene nuclear prelamin A recognition factor
Tssr106396 11 121237305 to 121237317 12 + TSS region transcription start site region 106396
Tssr106397 11 121245363 to 121245407 44 + TSS region transcription start site region 106397
Cpgi4342 11 121259185 to 121261025 1840 CpG island CpG island 4342
Tssr106398 11 121259983 to 121260055 72 + TSS region transcription start site region 106398
Foxk2 11 121259990 to 121309896 49906 + protein coding gene forkhead box K2
Tssr106399 11 121260112 to 121260121 9 + TSS region transcription start site region 106399
Tssr106400 11 121261196 to 121261200 4 + TSS region transcription start site region 106400
Tssr106401 11 121287970 to 121287995 25 + TSS region transcription start site region 106401
Tssr106402 11 121308368 to 121308370 2 + TSS region transcription start site region 106402
Tssr112455 11 121325598 to 121325602 4 - TSS region transcription start site region 112455
Wdr45b 11 121327224 to 121354445 27221 - protein coding gene WD repeat domain 45B
D11Ertd712e 11 121330509 to 121330710 201 DNA segment DNA segment, Chr 11, ERATO Doi 712, expressed
Tssr112456 11 121333573 to 121333577 4 - TSS region transcription start site region 112456
Cpgi4343 11 121353635 to 121354889 1254 CpG island CpG island 4343
Tssr112457 11 121354337 to 121354436 99 - TSS region transcription start site region 112457
Tssr3762 11 121354613 to 121354626 13 + TSS region transcription start site region 3762
Rab40b 11 121356125 to 121388251 32126 - protein coding gene Rab40B, member RAS oncogene family
D11Dcr45 11 121373396 to 121373491 95 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 45
Mir7236 11 121387145 to 121387204 59 - miRNA gene microRNA 7236
Cpgi4344 11 121387529 to 121388522 993 CpG island CpG island 4344
Tssr112458 11 121388186 to 121388267 81 - TSS region transcription start site region 112458
Gm11866 11 121415092 to 121415426 334 - pseudogene predicted gene 11866
Cpgi4345 11 121421017 to 121421940 923 CpG island CpG island 4345
Tssr106403 11 121421388 to 121421469 81 + TSS region transcription start site region 106403
Fn3krp 11 121421401 to 121431288 9887 + protein coding gene fructosamine 3 kinase related protein