MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:120970141-121011777

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rvfs2	11	100363360 to 120996339	20632979		QTL	Rift Valley fever susceptibility 2
Csnk1d	11	120961749 to 120991330	29581	-	protein coding gene	casein kinase 1, delta
Cpgi4335	11	120990141 to 120991777	1636		CpG island	CpG island 4335
Tssr106388	11	120990558 to 120990575	17	+	TSS region	transcription start site region 106388
Tssr112430	11	120991020 to 120991037	17	-	TSS region	transcription start site region 112430
Tssr112431	11	120991039 to 120991074	35	-	TSS region	transcription start site region 112431
Tssr112432	11	120991078 to 120991095	17	-	TSS region	transcription start site region 112432
Tssr112433	11	120991103 to 120991106	3	-	TSS region	transcription start site region 112433
Tssr112434	11	120991260 to 120991278	18	-	TSS region	transcription start site region 112434
Tssr112435	11	120991305 to 120991339	34	-	TSS region	transcription start site region 112435
Tssr106389	11	120991382 to 120991395	13	+	TSS region	transcription start site region 106389
Tssr106390	11	120991412 to 120991439	27	+	TSS region	transcription start site region 106390
Gm30062	11	120991438 to 121015421	23983	+	lncRNA gene	predicted gene, 30062
D11Mit69.2	11	120996133 to 120996262	129		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 69.2
D11Mit69	11	120996173 to 120996339	166		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 69
D11Dcr31	11	120996238 to 120996346	108		DNA segment	DNA Segment, Chr 11, Derry C. Roopenian 31
Gm11774	11	121003492 to 121003784	292	-	pseudogene	predicted gene 11774