Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:120853618-120953626

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc57 11 120826529 to 120932872 106343 - protein coding gene coiled-coil domain containing 57
Tssr112420 11 120856232 to 120856251 19 - TSS region transcription start site region 112420
Tssr112421 11 120866601 to 120866604 3 - TSS region transcription start site region 112421
Tssr112422 11 120866605 to 120866617 12 - TSS region transcription start site region 112422
Tssr112423 11 120866619 to 120866639 20 - TSS region transcription start site region 112423
Tssr112424 11 120866641 to 120866674 33 - TSS region transcription start site region 112424
Tssr112425 11 120882929 to 120882936 7 - TSS region transcription start site region 112425
Tssr112426 11 120903356 to 120903366 10 - TSS region transcription start site region 112426
Tssr112427 11 120903618 to 120903626 8 - TSS region transcription start site region 112427
Cpgi4332 11 120932526 to 120933182 656 CpG island CpG island 4332
Tssr112428 11 120932832 to 120932876 44 - TSS region transcription start site region 112428
A430102A20Rik 11 120933002 to 120934012 1010 + lncRNA gene RIKEN cDNA A430102A20 gene
Tssr112429 11 120938124 to 120938156 32 - TSS region transcription start site region 112429
Tssr106377 11 120939036 to 120939069 33 + TSS region transcription start site region 106377
Tssr3761 11 120941987 to 120941994 7 - TSS region transcription start site region 3761
Slc16a3 11 120948484 to 120959000 10516 + protein coding gene solute carrier family 16 (monocarboxylic acid transporters), member 3
Cpgi4333 11 120948484 to 120949699 1215 CpG island CpG island 4333
Tssr106378 11 120948493 to 120948533 40 + TSS region transcription start site region 106378
Tssr106379 11 120948543 to 120948553 10 + TSS region transcription start site region 106379
Tssr106380 11 120948714 to 120948746 32 + TSS region transcription start site region 106380
Tssr106381 11 120949100 to 120949114 14 + TSS region transcription start site region 106381
Tssr106382 11 120949516 to 120949519 3 + TSS region transcription start site region 106382
Cpgi4334 11 120950667 to 120951180 513 CpG island CpG island 4334