Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:120326534-120403168

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Actg1 11 120345687 to 120348495 2808 - protein coding gene actin, gamma, cytoplasmic 1
Gm23419 11 120346736 to 120346819 83 - miRNA gene predicted gene, 23419
Mir6935 11 120347350 to 120347413 63 - miRNA gene microRNA 6935
Tssr112287 11 120347431 to 120347459 28 - TSS region transcription start site region 112287
Cpgi4301 11 120347571 to 120350616 3045 CpG island CpG island 4301
Tssr112288 11 120348179 to 120348189 10 - TSS region transcription start site region 112288
Tssr112289 11 120348204 to 120348245 41 - TSS region transcription start site region 112289
Tssr112290 11 120348495 to 120348508 13 - TSS region transcription start site region 112290
Tssr112291 11 120348513 to 120348559 46 - TSS region transcription start site region 112291
0610009L18Rik 11 120348678 to 120351190 2512 + bidirectional promoter lncRNA gene RIKEN cDNA 0610009L18 gene
Tssr106280 11 120348682 to 120348782 100 + TSS region transcription start site region 106280
Tssr112292 11 120348751 to 120348791 40 - TSS region transcription start site region 112292
Tssr3756 11 120349278 to 120349290 12 + TSS region transcription start site region 3756
Tssr112293 11 120349414 to 120349427 13 - TSS region transcription start site region 112293
Tssr112294 11 120349844 to 120349862 18 - TSS region transcription start site region 112294
Tssr3757 11 120350271 to 120350286 15 + TSS region transcription start site region 3757
Tssr106281 11 120361156 to 120361202 46 + TSS region transcription start site region 106281
Tssr106282 11 120361506 to 120361543 37 + TSS region transcription start site region 106282
Fscn2 11 120361534 to 120368168 6634 + protein coding gene fascin actin-bundling protein 2
Tssr106283 11 120366462 to 120366504 42 + TSS region transcription start site region 106283
Faap100 11 120369562 to 120378746 9184 - protein coding gene Fanconi anemia core complex associated protein 100
Cpgi4302 11 120377911 to 120379205 1294 CpG island CpG island 4302
Tssr112295 11 120378692 to 120378779 87 - TSS region transcription start site region 112295
Gm9981 11 120378800 to 120379811 1011 unclassified gene predicted gene 9981
Nploc4 11 120380370 to 120437708 57338 - protein coding gene NPL4 homolog, ubiquitin recognition factor