Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:120234847-120375619

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bahcc1 11 120232947 to 120292296 59349 + protein coding gene BAH domain and coiled-coil containing 1
Cpgi4295 11 120233392 to 120235157 1765 CpG island CpG island 4295
Tssr112281 11 120235073 to 120235080 7 - TSS region transcription start site region 112281
Gm11772 11 120235234 to 120236122 888 - antisense lncRNA gene predicted gene 11772
Cpgi4296 11 120235570 to 120238168 2598 CpG island CpG island 4296
Tssr112282 11 120235868 to 120235899 31 - TSS region transcription start site region 112282
Tssr112283 11 120236052 to 120236058 6 - TSS region transcription start site region 112283
Tssr106278 11 120236493 to 120236524 31 + TSS region transcription start site region 106278
Tssr112284 11 120237309 to 120237335 26 - TSS region transcription start site region 112284
Tssr112285 11 120237356 to 120237367 11 - TSS region transcription start site region 112285
Tssr112286 11 120237600 to 120237646 46 - TSS region transcription start site region 112286
Tssr106279 11 120253044 to 120253063 19 + TSS region transcription start site region 106279
Cpgi4297 11 120261485 to 120261649 164 CpG island CpG island 4297
Gm47297 11 120274487 to 120274624 137 + miRNA gene predicted gene, 47297
Cpgi4298 11 120304847 to 120305619 772 CpG island CpG island 4298
Cpgi4299 11 120310650 to 120311456 806 CpG island CpG island 4299
Cpgi4300 11 120316327 to 120316724 397 CpG island CpG island 4300
Actg1 11 120345687 to 120348495 2808 - protein coding gene actin, gamma, cytoplasmic 1
Gm23419 11 120346736 to 120346819 83 - miRNA gene predicted gene, 23419
Mir6935 11 120347350 to 120347413 63 - miRNA gene microRNA 6935
Tssr112287 11 120347431 to 120347459 28 - TSS region transcription start site region 112287
Cpgi4301 11 120347571 to 120350616 3045 CpG island CpG island 4301
Tssr112288 11 120348179 to 120348189 10 - TSS region transcription start site region 112288
Tssr112289 11 120348204 to 120348245 41 - TSS region transcription start site region 112289
Tssr112290 11 120348495 to 120348508 13 - TSS region transcription start site region 112290
Tssr112291 11 120348513 to 120348559 46 - TSS region transcription start site region 112291
0610009L18Rik 11 120348678 to 120351190 2512 + bidirectional promoter lncRNA gene RIKEN cDNA 0610009L18 gene
Tssr106280 11 120348682 to 120348782 100 + TSS region transcription start site region 106280
Tssr112292 11 120348751 to 120348791 40 - TSS region transcription start site region 112292
Tssr3756 11 120349278 to 120349290 12 + TSS region transcription start site region 3756
Tssr112293 11 120349414 to 120349427 13 - TSS region transcription start site region 112293
Tssr112294 11 120349844 to 120349862 18 - TSS region transcription start site region 112294
Tssr3757 11 120350271 to 120350286 15 + TSS region transcription start site region 3757
Tssr106281 11 120361156 to 120361202 46 + TSS region transcription start site region 106281
Tssr106282 11 120361506 to 120361543 37 + TSS region transcription start site region 106282
Fscn2 11 120361534 to 120368168 6634 + protein coding gene fascin actin-bundling protein 2
Tssr106283 11 120366462 to 120366504 42 + TSS region transcription start site region 106283
Faap100 11 120369562 to 120378746 9184 - protein coding gene Fanconi anemia core complex associated protein 100