Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:120078960-120176346

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cep131 11 120064430 to 120086827 22397 - protein coding gene centrosomal protein 131
Cpgi4285 11 120086065 to 120087405 1340 CpG island CpG island 4285
Tssr112262 11 120086768 to 120086780 12 - TSS region transcription start site region 112262
Tssr112263 11 120086790 to 120086852 62 - TSS region transcription start site region 112263
Tepsin 11 120090531 to 120098731 8200 - protein coding gene TEPSIN, adaptor related protein complex 4 accessory protein
Cpgi4286 11 120098316 to 120099669 1353 CpG island CpG island 4286
Tssr112264 11 120098673 to 120098702 29 - TSS region transcription start site region 112264
Tssr106268 11 120098910 to 120098983 73 + TSS region transcription start site region 106268
Ndufaf8 11 120098934 to 120100424 1490 + protein coding gene NADH:ubiquinone oxidoreductase complex assembly factor 8
Tssr112265 11 120099418 to 120099467 49 - TSS region transcription start site region 112265
Slc38a10 11 120103960 to 120151346 47386 - protein coding gene solute carrier family 38, member 10
Cpgi4287 11 120122328 to 120122493 165 CpG island CpG island 4287
Tssr112266 11 120136698 to 120136707 9 - TSS region transcription start site region 112266
Tssr112267 11 120139407 to 120139422 15 - TSS region transcription start site region 112267
Tssr112268 11 120139427 to 120139432 5 - TSS region transcription start site region 112268
Tssr112269 11 120139436 to 120139448 12 - TSS region transcription start site region 112269
Tssr112270 11 120139449 to 120139451 2 - TSS region transcription start site region 112270
Tssr112271 11 120139495 to 120139496 1 - TSS region transcription start site region 112271
Tssr112272 11 120142890 to 120142891 1 - TSS region transcription start site region 112272
Tssr106269 11 120145128 to 120145130 2 + TSS region transcription start site region 106269
D11Mit293 11 120149142 to 120149254 112 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 293
Tssr106270 11 120150528 to 120150567 39 + TSS region transcription start site region 106270
Cpgi4288 11 120150544 to 120151561 1017 CpG island CpG island 4288
Gm11769 11 120150562 to 120152341 1779 + lncRNA gene predicted gene 11769
Tssr112273 11 120151194 to 120151354 160 - TSS region transcription start site region 112273
Gm39486 11 120157590 to 120164239 6649 - lncRNA gene predicted gene, 39486
Tssr112274 11 120164657 to 120164659 2 - TSS region transcription start site region 112274
Tssr106271 11 120164774 to 120164792 18 + TSS region transcription start site region 106271