Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:119536259-119806282

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nptx1 11 119538719 to 119547753 9034 - protein coding gene neuronal pentraxin 1
Tssr112230 11 119541133 to 119541152 19 - TSS region transcription start site region 112230
Tssr112231 11 119541445 to 119541465 20 - TSS region transcription start site region 112231
Cpgi4275 11 119546486 to 119550124 3638 CpG island CpG island 4275
Tssr112232 11 119547744 to 119547759 15 - TSS region transcription start site region 112232
Gm11762 11 119548630 to 119569046 20416 + lncRNA gene predicted gene 11762
Cpgi4276 11 119602785 to 119603900 1115 CpG island CpG island 4276
Rptor 11 119602905 to 119899576 296671 + protein coding gene regulatory associated protein of MTOR, complex 1
Tssr106242 11 119602981 to 119603034 53 + TSS region transcription start site region 106242
Tssr106243 11 119603580 to 119603611 31 + TSS region transcription start site region 106243
Gm11761 11 119646186 to 119646630 444 - pseudogene predicted gene 11761
Tssr106244 11 119671259 to 119671282 23 + TSS region transcription start site region 106244
Tssr106245 11 119671293 to 119671304 11 + TSS region transcription start site region 106245
Tssr106246 11 119675470 to 119675482 12 + TSS region transcription start site region 106246
Tssr112233 11 119676955 to 119676963 8 - TSS region transcription start site region 112233
Tssr106247 11 119680993 to 119681030 37 + TSS region transcription start site region 106247
Tssr106248 11 119724989 to 119725021 32 + TSS region transcription start site region 106248
Tssr106249 11 119729526 to 119729548 22 + TSS region transcription start site region 106249
Tssr106250 11 119729578 to 119729592 14 + TSS region transcription start site region 106250
Gm23663 11 119746401 to 119746480 79 + snoRNA gene predicted gene, 23663
Tssr112234 11 119758451 to 119758452 1 - TSS region transcription start site region 112234