Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:119015796-119097331

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35829 11 119011305 to 119023363 12058 - lncRNA gene predicted gene, 35829
Cpgi4245 11 119022526 to 119023899 1373 CpG island CpG island 4245
Cbx2 11 119023019 to 119031275 8256 + protein coding gene chromobox 2
Tssr106159 11 119023032 to 119023104 72 + TSS region transcription start site region 106159
Cpgi4246 11 119034133 to 119034724 591 CpG island CpG island 4246
Cpgi4247 11 119035370 to 119035758 388 CpG island CpG island 4247
Cbx8 11 119036303 to 119040913 4610 - protein coding gene chromobox 8
Cpgi4248 11 119037113 to 119037719 606 CpG island CpG island 4248
Cpgi4249 11 119040377 to 119043372 2995 CpG island CpG island 4249
Tssr112202 11 119040883 to 119040903 20 - TSS region transcription start site region 112202
Tssr112203 11 119040905 to 119040937 32 - TSS region transcription start site region 112203
Cpgi4250 11 119044792 to 119045420 628 CpG island CpG island 4250
Cpgi4251 11 119046513 to 119048284 1771 CpG island CpG island 4251
Cpgi4252 11 119053037 to 119055385 2348 CpG island CpG island 4252
Tssr112204 11 119053390 to 119053401 11 - TSS region transcription start site region 112204
Tssr112205 11 119053433 to 119053437 4 - TSS region transcription start site region 112205
Tssr106160 11 119053583 to 119053603 20 + TSS region transcription start site region 106160
Cpgi4253 11 119055796 to 119057331 1535 CpG island CpG island 4253
Cpgi4254 11 119058110 to 119059015 905 CpG island CpG island 4254
Gm26508 11 119077573 to 119081865 4292 + lincRNA gene predicted gene, 26508
Cbx4 11 119077573 to 119086221 8648 - protein coding gene chromobox 4
Tssr106161 11 119081373 to 119081415 42 + TSS region transcription start site region 106161
Tssr106162 11 119081724 to 119081743 19 + TSS region transcription start site region 106162
Cpgi4255 11 119085404 to 119086801 1397 CpG island CpG island 4255
Tssr112206 11 119086231 to 119086250 19 - TSS region transcription start site region 112206
Tssr112207 11 119086266 to 119086284 18 - TSS region transcription start site region 112207
Tssr106163 11 119086819 to 119086825 6 + TSS region transcription start site region 106163
Cpgi4256 11 119087233 to 119087722 489 CpG island CpG island 4256
Tssr106164 11 119089329 to 119089337 8 + TSS region transcription start site region 106164
Tssr106165 11 119089385 to 119089388 3 + TSS region transcription start site region 106165
Cpgi4257 11 119089421 to 119091492 2071 CpG island CpG island 4257
Gm39482 11 119093141 to 119095754 2613 + lncRNA gene predicted gene, 39482