Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:118396289-118429086

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lgals3bp 11 118392752 to 118401931 9179 - protein coding gene lectin, galactoside-binding, soluble, 3 binding protein
Tssr112160 11 118396692 to 118396741 49 - TSS region transcription start site region 112160
Tssr112161 11 118396758 to 118396769 11 - TSS region transcription start site region 112161
Tssr112162 11 118396823 to 118396838 15 - TSS region transcription start site region 112162
Tssr112163 11 118398411 to 118398460 49 - TSS region transcription start site region 112163
Tssr112164 11 118398529 to 118398540 11 - TSS region transcription start site region 112164
Tssr112165 11 118399853 to 118399856 3 - TSS region transcription start site region 112165
Tssr112166 11 118401826 to 118401964 138 - TSS region transcription start site region 112166
Tssr106138 11 118402047 to 118402063 16 + TSS region transcription start site region 106138
Cant1 11 118406289 to 118419086 12797 - protein coding gene calcium activated nucleotidase 1
Tssr112167 11 118415800 to 118415824 24 - TSS region transcription start site region 112167
Tssr112168 11 118415834 to 118415841 7 - TSS region transcription start site region 112168
Cpgi4233 11 118418561 to 118419475 914 CpG island CpG island 4233
Tssr112169 11 118418956 to 118419015 59 - TSS region transcription start site region 112169
Tssr112170 11 118419018 to 118419046 28 - TSS region transcription start site region 112170
Tssr112171 11 118419116 to 118419131 15 - TSS region transcription start site region 112171
Tssr106139 11 118419223 to 118419251 28 + TSS region transcription start site region 106139
Gm35598 11 118422161 to 118428213 6052 - lncRNA gene predicted gene, 35598
Cpgi4234 11 118423609 to 118423820 211 CpG island CpG island 4234
Tssr112172 11 118426513 to 118426519 6 - TSS region transcription start site region 112172
Tssr106140 11 118428115 to 118428141 26 + TSS region transcription start site region 106140
Tssr106141 11 118428150 to 118428191 41 + TSS region transcription start site region 106141
C1qtnf1 11 118428203 to 118449963 21760 + protein coding gene C1q and tumor necrosis factor related protein 1
Tssr106142 11 118428208 to 118428231 23 + TSS region transcription start site region 106142
Tssr106143 11 118428245 to 118428256 11 + TSS region transcription start site region 106143
Tssr106144 11 118428273 to 118428284 11 + TSS region transcription start site region 106144
Tssr106145 11 118428401 to 118428451 50 + TSS region transcription start site region 106145
Tssr106146 11 118428458 to 118428468 10 + TSS region transcription start site region 106146
Tssr106147 11 118428493 to 118428509 16 + TSS region transcription start site region 106147
Tssr106148 11 118428517 to 118428548 31 + TSS region transcription start site region 106148