Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:118393515-118493537

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lgals3bp 11 118392752 to 118401931 9179 - protein coding gene lectin, galactoside-binding, soluble, 3 binding protein
Tssr106135 11 118393519 to 118393543 24 + TSS region transcription start site region 106135
Tssr112144 11 118393520 to 118393537 17 - TSS region transcription start site region 112144
Tssr112145 11 118393541 to 118393556 15 - TSS region transcription start site region 112145
Tssr112146 11 118393557 to 118393575 18 - TSS region transcription start site region 112146
Tssr112147 11 118393579 to 118393592 13 - TSS region transcription start site region 112147
Tssr112148 11 118393602 to 118393618 16 - TSS region transcription start site region 112148
Tssr112149 11 118393621 to 118393633 12 - TSS region transcription start site region 112149
Tssr112150 11 118393635 to 118393642 7 - TSS region transcription start site region 112150
Tssr112151 11 118393667 to 118393696 29 - TSS region transcription start site region 112151
Tssr112152 11 118393705 to 118393744 39 - TSS region transcription start site region 112152
Tssr112153 11 118393828 to 118393837 9 - TSS region transcription start site region 112153
Tssr112154 11 118393855 to 118393866 11 - TSS region transcription start site region 112154
Tssr112155 11 118393933 to 118393940 7 - TSS region transcription start site region 112155
Tssr106136 11 118393936 to 118393962 26 + TSS region transcription start site region 106136
Tssr112156 11 118393941 to 118393950 9 - TSS region transcription start site region 112156
Tssr112157 11 118393956 to 118393970 14 - TSS region transcription start site region 112157
Tssr112158 11 118393978 to 118393981 3 - TSS region transcription start site region 112158
Tssr112159 11 118393983 to 118394021 38 - TSS region transcription start site region 112159
Tssr106137 11 118394003 to 118394017 14 + TSS region transcription start site region 106137
Tssr112160 11 118396692 to 118396741 49 - TSS region transcription start site region 112160
Tssr112161 11 118396758 to 118396769 11 - TSS region transcription start site region 112161
Tssr112162 11 118396823 to 118396838 15 - TSS region transcription start site region 112162
Tssr112163 11 118398411 to 118398460 49 - TSS region transcription start site region 112163
Tssr112164 11 118398529 to 118398540 11 - TSS region transcription start site region 112164
Tssr112165 11 118399853 to 118399856 3 - TSS region transcription start site region 112165
Tssr112166 11 118401826 to 118401964 138 - TSS region transcription start site region 112166
Tssr106138 11 118402047 to 118402063 16 + TSS region transcription start site region 106138
Cant1 11 118406289 to 118419086 12797 - protein coding gene calcium activated nucleotidase 1
Tssr112167 11 118415800 to 118415824 24 - TSS region transcription start site region 112167
Tssr112168 11 118415834 to 118415841 7 - TSS region transcription start site region 112168
Cpgi4233 11 118418561 to 118419475 914 CpG island CpG island 4233
Tssr112169 11 118418956 to 118419015 59 - TSS region transcription start site region 112169
Tssr112170 11 118419018 to 118419046 28 - TSS region transcription start site region 112170
Tssr112171 11 118419116 to 118419131 15 - TSS region transcription start site region 112171
Tssr106139 11 118419223 to 118419251 28 + TSS region transcription start site region 106139
Gm35598 11 118422161 to 118428213 6052 - lncRNA gene predicted gene, 35598
Cpgi4234 11 118423609 to 118423820 211 CpG island CpG island 4234
Tssr112172 11 118426513 to 118426519 6 - TSS region transcription start site region 112172
Tssr106140 11 118428115 to 118428141 26 + TSS region transcription start site region 106140
Tssr106141 11 118428150 to 118428191 41 + TSS region transcription start site region 106141
C1qtnf1 11 118428203 to 118449963 21760 + protein coding gene C1q and tumor necrosis factor related protein 1
Tssr106142 11 118428208 to 118428231 23 + TSS region transcription start site region 106142
Tssr106143 11 118428245 to 118428256 11 + TSS region transcription start site region 106143
Tssr106144 11 118428273 to 118428284 11 + TSS region transcription start site region 106144
Tssr106145 11 118428401 to 118428451 50 + TSS region transcription start site region 106145
Tssr106146 11 118428458 to 118428468 10 + TSS region transcription start site region 106146
Tssr106147 11 118428493 to 118428509 16 + TSS region transcription start site region 106147
Tssr106148 11 118428517 to 118428548 31 + TSS region transcription start site region 106148
Tssr106149 11 118433826 to 118433863 37 + TSS region transcription start site region 106149
Tssr106150 11 118443515 to 118443537 22 + TSS region transcription start site region 106150
Gm11747 11 118444200 to 118454995 10795 - antisense lncRNA gene predicted gene 11747
Tssr106151 11 118449838 to 118449847 9 + TSS region transcription start site region 106151
Tssr106152 11 118449873 to 118449886 13 + TSS region transcription start site region 106152
Gm18156 11 118471606 to 118472115 509 - pseudogene predicted gene, 18156
Tssr106153 11 118475826 to 118475836 10 + TSS region transcription start site region 106153
Gm11748 11 118476470 to 118479458 2988 - unclassified non-coding RNA gene predicted gene 11748
Cpgi4235 11 118476670 to 118477509 839 CpG island CpG island 4235
Tssr106154 11 118476824 to 118476830 6 + TSS region transcription start site region 106154
Engase 11 118476829 to 118489209 12380 + protein coding gene endo-beta-N-acetylglucosaminidase
Tssr106155 11 118476934 to 118476994 60 + TSS region transcription start site region 106155
Rbfox3 11 118489762 to 118911597 421835 - protein coding gene RNA binding protein, fox-1 homolog (C. elegans) 3
Tssr106156 11 118490118 to 118490120 2 + TSS region transcription start site region 106156
Tssr112173 11 118491233 to 118491246 13 - TSS region transcription start site region 112173