Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:116672167-116837883

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi4193 11 116671204 to 116672396 1192 CpG island CpG island 4193
1810032O08Rik 11 116671660 to 116675798 4138 + protein coding gene RIKEN cDNA 1810032O08 gene
Snord1c 11 116672506 to 116672581 75 + snoRNA gene small nucleolar RNA, C/D box 1C
Snord1b 11 116674148 to 116674222 74 + snoRNA gene small nucleolar RNA, C/D box 1B
Snord1a 11 116674598 to 116674671 73 + snoRNA gene small nucleolar RNA, C/D box 1A
St6galnac2 11 116676703 to 116695234 18531 - protein coding gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
Tssr111962 11 116677442 to 116677448 6 - TSS region transcription start site region 111962
Tssr105981 11 116678254 to 116678255 1 + TSS region transcription start site region 105981
Tssr111963 11 116679185 to 116679191 6 - TSS region transcription start site region 111963
Tssr111964 11 116679193 to 116679203 10 - TSS region transcription start site region 111964
Tssr111965 11 116679221 to 116679226 5 - TSS region transcription start site region 111965
Tssr111966 11 116679982 to 116679999 17 - TSS region transcription start site region 111966
Tssr111967 11 116680056 to 116680068 12 - TSS region transcription start site region 111967
Tssr111968 11 116680075 to 116680086 11 - TSS region transcription start site region 111968
Tssr105982 11 116680278 to 116680293 15 + TSS region transcription start site region 105982
Tssr111969 11 116680596 to 116680601 5 - TSS region transcription start site region 111969
Tssr111970 11 116680704 to 116680713 9 - TSS region transcription start site region 111970
Tssr111971 11 116680874 to 116680914 40 - TSS region transcription start site region 111971
Cpgi4194 11 116694121 to 116695026 905 CpG island CpG island 4194
Tssr111972 11 116694555 to 116694560 5 - TSS region transcription start site region 111972
Tssr111973 11 116694580 to 116694668 88 - TSS region transcription start site region 111973
Tssr111974 11 116694779 to 116694800 21 - TSS region transcription start site region 111974
Tssr111975 11 116694802 to 116694882 80 - TSS region transcription start site region 111975
Tssr111976 11 116695229 to 116695242 13 - TSS region transcription start site region 111976
Tssr111977 11 116705160 to 116705175 15 - TSS region transcription start site region 111977
Tssr111978 11 116725195 to 116725202 7 - TSS region transcription start site region 111978
Tssr105983 11 116725433 to 116725437 4 + TSS region transcription start site region 105983
Gm11735 11 116739062 to 116749833 10771 - pseudogene predicted gene 11735
Tssr111979 11 116749908 to 116749938 30 - TSS region transcription start site region 111979
Tssr105984 11 116751044 to 116751081 37 + TSS region transcription start site region 105984
Tssr105985 11 116751706 to 116751721 15 + TSS region transcription start site region 105985
BC018473 11 116752167 to 116757883 5716 + antisense lncRNA gene cDNA sequence BC018473
Tssr105986 11 116752228 to 116752235 7 + TSS region transcription start site region 105986
Tssr105987 11 116752312 to 116752315 3 + TSS region transcription start site region 105987
Tssr105988 11 116752324 to 116752350 26 + TSS region transcription start site region 105988
Tssr105989 11 116752356 to 116752363 7 + TSS region transcription start site region 105989
Tssr105990 11 116752650 to 116752669 19 + TSS region transcription start site region 105990
Tssr105991 11 116752933 to 116752938 5 + TSS region transcription start site region 105991
Tssr105992 11 116753177 to 116753188 11 + TSS region transcription start site region 105992
Tssr105993 11 116753275 to 116753287 12 + TSS region transcription start site region 105993
St6galnac1 11 116765025 to 116775507 10482 - protein coding gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
Mxra7 11 116803400 to 116828068 24668 - protein coding gene matrix-remodelling associated 7
Tssr111980 11 116806977 to 116806981 4 - TSS region transcription start site region 111980
Tssr111981 11 116807144 to 116807153 9 - TSS region transcription start site region 111981
Tssr111982 11 116807650 to 116807661 11 - TSS region transcription start site region 111982
Tssr111983 11 116807680 to 116807758 78 - TSS region transcription start site region 111983
Tssr111984 11 116807769 to 116807781 12 - TSS region transcription start site region 111984
Tssr105994 11 116807869 to 116807892 23 + TSS region transcription start site region 105994
Tssr111985 11 116808157 to 116808162 5 - TSS region transcription start site region 111985
Tssr105995 11 116813221 to 116813238 17 + TSS region transcription start site region 105995
Tssr111986 11 116816213 to 116816247 34 - TSS region transcription start site region 111986
Cpgi4195 11 116827079 to 116828508 1429 CpG island CpG island 4195
Tssr111987 11 116828000 to 116828071 71 - TSS region transcription start site region 111987
Jmjd6 11 116837432 to 116843449 6017 - protein coding gene jumonji domain containing 6