Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:116560473-116660485

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ube2o 11 116537740 to 116581447 43707 - protein coding gene ubiquitin-conjugating enzyme E2O
Tssr111941 11 116579627 to 116579631 4 - TSS region transcription start site region 111941
Cpgi4189 11 116580525 to 116581911 1386 CpG island CpG island 4189
Tssr111942 11 116581446 to 116581472 26 - TSS region transcription start site region 111942
Tssr111943 11 116581475 to 116581513 38 - TSS region transcription start site region 111943
1700074G04Rik 11 116589635 to 116589780 145 unclassified gene RIKEN cDNA 1700074G04 gene
Aanat 11 116591721 to 116597680 5959 + protein coding gene arylalkylamine N-acetyltransferase
D11Mit102 11 116593049 to 116593210 161 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 102
Rhbdf2 11 116598165 to 116627019 28854 - protein coding gene rhomboid 5 homolog 2
Tssr111944 11 116598457 to 116598477 20 - TSS region transcription start site region 111944
Tssr111945 11 116605027 to 116605045 18 - TSS region transcription start site region 111945
Tssr111946 11 116610473 to 116610485 12 - TSS region transcription start site region 111946
Tssr3740 11 116615907 to 116615909 2 - TSS region transcription start site region 3740
Tssr111947 11 116617600 to 116617624 24 - TSS region transcription start site region 111947
Cpgi4190 11 116623673 to 116624739 1066 CpG island CpG island 4190
Tssr111948 11 116623785 to 116623817 32 - TSS region transcription start site region 111948
Tssr111949 11 116624209 to 116624227 18 - TSS region transcription start site region 111949
Tssr111950 11 116624238 to 116624256 18 - TSS region transcription start site region 111950
Tssr111951 11 116624262 to 116624273 11 - TSS region transcription start site region 111951
Tssr111952 11 116624300 to 116624309 9 - TSS region transcription start site region 111952
Tssr105973 11 116624388 to 116624405 17 + TSS region transcription start site region 105973
Tssr105974 11 116624408 to 116624430 22 + TSS region transcription start site region 105974
Tssr105975 11 116624440 to 116624451 11 + TSS region transcription start site region 105975
Tssr105976 11 116624452 to 116624458 6 + TSS region transcription start site region 105976
Tssr111953 11 116626868 to 116626875 7 - TSS region transcription start site region 111953
Tssr111954 11 116626925 to 116626937 12 - TSS region transcription start site region 111954
Tssr111955 11 116626951 to 116626960 9 - TSS region transcription start site region 111955
Cygb 11 116645595 to 116654313 8718 - protein coding gene cytoglobin
Cpgi4191 11 116653495 to 116654710 1215 CpG island CpG island 4191
Prcd 11 116653889 to 116668389 14500 + protein coding gene photoreceptor disc component
Tssr111956 11 116653936 to 116653995 59 - TSS region transcription start site region 111956
Tssr111957 11 116654002 to 116654023 21 - TSS region transcription start site region 111957
Tssr111958 11 116654038 to 116654068 30 - TSS region transcription start site region 111958
Tssr111959 11 116654075 to 116654082 7 - TSS region transcription start site region 111959
Tssr111960 11 116654245 to 116654325 80 - TSS region transcription start site region 111960
Tssr105977 11 116657106 to 116657117 11 + TSS region transcription start site region 105977
Tssr105978 11 116657123 to 116657140 17 + TSS region transcription start site region 105978
Tssr3741 11 116657151 to 116657152 1 + TSS region transcription start site region 3741
Tssr105979 11 116657513 to 116657536 23 + TSS region transcription start site region 105979
Cpgi4192 11 116657915 to 116658097 182 CpG island CpG island 4192