Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:116362127-116463594

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf157 11 116336353 to 116413032 76679 - protein coding gene ring finger protein 157
D11Dcr30 11 116363355 to 116363455 100 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 30
D11Mit203 11 116363361 to 116363500 139 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 203
Alcw8 11 116363361 to 116363500 139 QTL alcohol withdrawal 8
D11Mit203.1 11 116363482 to 116363636 154 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 203.1
Tssr105954 11 116382705 to 116382717 12 + TSS region transcription start site region 105954
Rps11-ps2 11 116382750 to 116383205 455 + pseudogene ribosomal protein S11, pseudogene 2
Cpgi4181 11 116412127 to 116413594 1467 CpG island CpG island 4181
Tssr111918 11 116412965 to 116413000 35 - TSS region transcription start site region 111918
Tssr111919 11 116413015 to 116413069 54 - TSS region transcription start site region 111919
n-TAagc3 11 116415979 to 116416051 72 - tRNA gene nuclear encoded tRNA alanine 3 (anticodon AGC)
Tssr111920 11 116426028 to 116426062 34 - TSS region transcription start site region 111920
Tssr111921 11 116429486 to 116429529 43 - TSS region transcription start site region 111921
Cpgi4182 11 116433728 to 116435173 1445 CpG island CpG island 4182
Tssr111922 11 116433792 to 116433822 30 - TSS region transcription start site region 111922
Tssr105955 11 116434067 to 116434078 11 + TSS region transcription start site region 105955
Tssr105956 11 116434087 to 116434106 19 + TSS region transcription start site region 105956
Ubald2 11 116434094 to 116439077 4983 + protein coding gene UBA-like domain containing 2
Tssr105957 11 116434194 to 116434227 33 + TSS region transcription start site region 105957
Tssr105958 11 116434232 to 116434254 22 + TSS region transcription start site region 105958
Tssr105959 11 116436972 to 116437020 48 + TSS region transcription start site region 105959
Qrich2 11 116441325 to 116466241 24916 - protein coding gene glutamine rich 2
Cpgi4183 11 116446434 to 116446749 315 CpG island CpG island 4183
Tssr111923 11 116448394 to 116448406 12 - TSS region transcription start site region 111923
Tssr111924 11 116459930 to 116459947 17 - TSS region transcription start site region 111924
Tssr111925 11 116459957 to 116459972 15 - TSS region transcription start site region 111925