Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:116178254-116218269

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acox1 11 116171888 to 116199045 27157 - protein coding gene acyl-Coenzyme A oxidase 1, palmitoyl
Tssr111880 11 116178275 to 116178306 31 - TSS region transcription start site region 111880
D11Dcr39 11 116186707 to 116186808 101 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 39
Tssr111881 11 116186895 to 116186899 4 - TSS region transcription start site region 111881
Tssr105948 11 116189414 to 116189460 46 + TSS region transcription start site region 105948
Tssr111882 11 116189542 to 116189550 8 - TSS region transcription start site region 111882
Tssr111883 11 116193538 to 116193561 23 - TSS region transcription start site region 111883
Tssr111884 11 116197987 to 116197997 10 - TSS region transcription start site region 111884
Tssr111885 11 116198254 to 116198269 15 - TSS region transcription start site region 111885
Tssr111886 11 116198332 to 116198347 15 - TSS region transcription start site region 111886
Cpgi4171 11 116198400 to 116199404 1004 CpG island CpG island 4171
Tssr111887 11 116198659 to 116198663 4 - TSS region transcription start site region 111887
Tssr111888 11 116198673 to 116198677 4 - TSS region transcription start site region 111888
Tssr111889 11 116198701 to 116198836 135 - TSS region transcription start site region 111889
Tssr105949 11 116198853 to 116198903 50 + TSS region transcription start site region 105949
Ten1 11 116198855 to 116215318 16463 + protein coding gene TEN1 telomerase capping complex subunit
Tssr111890 11 116199006 to 116199037 31 - TSS region transcription start site region 111890
Tssr111891 11 116199040 to 116199090 50 - TSS region transcription start site region 111891
Tssr111892 11 116206477 to 116206484 7 - TSS region transcription start site region 111892
Tssr105950 11 116210963 to 116211006 43 + TSS region transcription start site region 105950
Cdk3 11 116216003 to 116220287 4284 + polymorphic pseudogene cyclin-dependent kinase 3