Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:115990304-116070385

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itgb4 11 115974725 to 116008412 33687 + protein coding gene integrin beta 4
B230344G16Rik 11 115988184 to 115990668 2484 - lincRNA gene RIKEN cDNA B230344G16 gene
Tssr105936 11 115992941 to 115992990 49 + TSS region transcription start site region 105936
Tssr105937 11 115993009 to 115993021 12 + TSS region transcription start site region 105937
Tssr105938 11 115993062 to 115993072 10 + TSS region transcription start site region 105938
Tssr105939 11 115993103 to 115993112 9 + TSS region transcription start site region 105939
Cpgi4156 11 116004702 to 116005707 1005 CpG island CpG island 4156
Tssr105940 11 116006523 to 116006542 19 + TSS region transcription start site region 105940
Tssr105941 11 116006549 to 116006564 15 + TSS region transcription start site region 105941
Galk1 11 116008457 to 116012719 4262 - protein coding gene galactokinase 1
Cpgi4157 11 116012245 to 116013069 824 CpG island CpG island 4157
Tssr111809 11 116012678 to 116012711 33 - TSS region transcription start site region 111809
Tssr111810 11 116012713 to 116012724 11 - TSS region transcription start site region 111810
Tssr111811 11 116020559 to 116020563 4 - TSS region transcription start site region 111811
Tssr3735 11 116021247 to 116021251 4 - TSS region transcription start site region 3735
H3f3b 11 116021961 to 116025450 3489 - protein coding gene H3 histone, family 3B
Tssr111812 11 116022648 to 116022677 29 - TSS region transcription start site region 111812
Tssr111813 11 116022836 to 116022850 14 - TSS region transcription start site region 111813
Cpgi4158 11 116023584 to 116024761 1177 CpG island CpG island 4158
Tssr111814 11 116023964 to 116023977 13 - TSS region transcription start site region 111814
Tssr3736 11 116024058 to 116024082 24 - TSS region transcription start site region 3736
Tssr111815 11 116024085 to 116024114 29 - TSS region transcription start site region 111815
Tssr111816 11 116024489 to 116024511 22 - TSS region transcription start site region 111816
Tssr111817 11 116027391 to 116027401 10 - TSS region transcription start site region 111817
Tssr111818 11 116027849 to 116027858 9 - TSS region transcription start site region 111818
Tssr111819 11 116027934 to 116027945 11 - TSS region transcription start site region 111819
Tssr111820 11 116027961 to 116027978 17 - TSS region transcription start site region 111820
Cpgi4159 11 116029936 to 116031097 1161 CpG island CpG island 4159
Tssr111821 11 116030082 to 116030121 39 - TSS region transcription start site region 111821
Tssr105942 11 116030304 to 116030385 81 + TSS region transcription start site region 105942
Unk 11 116030322 to 116061214 30892 + protein coding gene unkempt family zinc finger
Tssr105943 11 116030665 to 116030698 33 + TSS region transcription start site region 105943
D11Wsu173e 11 116036591 to 116036816 225 DNA segment DNA segment, Chr 11, Wayne State University 173, expressed
Gm38482 11 116039988 to 116041400 1412 + lncRNA gene predicted gene, 38482
Unc13d 11 116062095 to 116077961 15866 - protein coding gene unc-13 homolog D