Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:115793981-115893986

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem94 11 115765433 to 115799033 33600 + protein coding gene transmembrane protein 94
Mir5621 11 115795824 to 115795886 62 + miRNA gene microRNA 5621
Caskin2 11 115799183 to 115813639 14456 - protein coding gene CASK-interacting protein 2
Tssr111800 11 115808068 to 115808106 38 - TSS region transcription start site region 111800
Tssr111801 11 115812136 to 115812230 94 - TSS region transcription start site region 111801
Cpgi4148 11 115813228 to 115815560 2332 CpG island CpG island 4148
Tssr111802 11 115813563 to 115813593 30 - TSS region transcription start site region 111802
Tssr111803 11 115813604 to 115813609 5 - TSS region transcription start site region 111803
Tssr111804 11 115813621 to 115813654 33 - TSS region transcription start site region 111804
Tssr105905 11 115814276 to 115814279 3 + TSS region transcription start site region 105905
Tsen54 11 115814724 to 115823094 8370 + protein coding gene tRNA splicing endonuclease subunit 54
Tssr105906 11 115814732 to 115814778 46 + TSS region transcription start site region 105906
Cpgi4149 11 115823624 to 115824776 1152 CpG island CpG island 4149
Tssr105907 11 115824029 to 115824097 68 + TSS region transcription start site region 105907
Llgl2 11 115824049 to 115855780 31731 + protein coding gene LLGL2 scribble cell polarity complex component
Tssr105908 11 115832804 to 115832820 16 + TSS region transcription start site region 105908
Tssr105909 11 115834338 to 115834349 11 + TSS region transcription start site region 105909
Tssr111805 11 115843981 to 115843986 5 - TSS region transcription start site region 111805
D11Jpk4 11 115846700 to 115846851 151 DNA segment DNA segment, Chr 11, Japan, Kominami 4
Cpgi4150 11 115858123 to 115860329 2206 CpG island CpG island 4150
Myo15b 11 115858406 to 115892603 34197 + protein coding gene myosin XVB
Tssr111806 11 115871325 to 115871326 1 - TSS region transcription start site region 111806
Tssr105910 11 115877497 to 115877548 51 + TSS region transcription start site region 105910
D11Dcr38 11 115879431 to 115879526 95 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 38
Tssr105911 11 115882890 to 115882901 11 + TSS region transcription start site region 105911
Tssr105912 11 115882931 to 115882957 26 + TSS region transcription start site region 105912
Cpgi4151 11 115883506 to 115883830 324 CpG island CpG island 4151
Tssr111807 11 115885231 to 115885236 5 - TSS region transcription start site region 111807
Tssr105913 11 115887610 to 115887651 41 + TSS region transcription start site region 105913
Recql5 11 115892595 to 115933477 40882 - protein coding gene RecQ protein-like 5