Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:115422961-115473060

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kctd2 11 115420128 to 115431274 11146 + protein coding gene potassium channel tetramerisation domain containing 2
Cpgi4133 11 115436013 to 115436169 156 CpG island CpG island 4133
Tssr105866 11 115440515 to 115440524 9 + TSS region transcription start site region 105866
Tssr105867 11 115440540 to 115440554 14 + TSS region transcription start site region 105867
Trim80 11 115440545 to 115448268 7723 + protein coding gene tripartite motif-containing 80
Cpgi4134 11 115441493 to 115441782 289 CpG island CpG island 4134
Mir3968 11 115447961 to 115448060 99 - miRNA gene microRNA 3968
Berr2 11 115461783 to 115461932 149 QTL berghei resistance locus 2
D11Mit338 11 115461783 to 115461932 149 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 338
Tssr111754 11 115461912 to 115461932 20 - TSS region transcription start site region 111754
D11Mit338.3 11 115461912 to 115462025 113 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 338.3
Gm11695 11 115462045 to 115463454 1409 - antisense lncRNA gene predicted gene 11695
Tssr105868 11 115462373 to 115462380 7 + TSS region transcription start site region 105868
Tssr105869 11 115462464 to 115462483 19 + TSS region transcription start site region 105869
Slc16a5 11 115462474 to 115474398 11924 + protein coding gene solute carrier family 16 (monocarboxylic acid transporters), member 5
Tssr105870 11 115462710 to 115462731 21 + TSS region transcription start site region 105870
Tssr111755 11 115462803 to 115462825 22 - TSS region transcription start site region 111755
Tssr111756 11 115463394 to 115463481 87 - TSS region transcription start site region 111756
Tssr111757 11 115463645 to 115463661 16 - TSS region transcription start site region 111757
Tssr111758 11 115463671 to 115463702 31 - TSS region transcription start site region 111758
Tssr105871 11 115463744 to 115463753 9 + TSS region transcription start site region 105871
Tssr105872 11 115463767 to 115463784 17 + TSS region transcription start site region 105872
Tssr105873 11 115463798 to 115463811 13 + TSS region transcription start site region 105873
Tssr105874 11 115463843 to 115463852 9 + TSS region transcription start site region 105874
Tssr105875 11 115465553 to 115465557 4 + TSS region transcription start site region 105875
Tssr3732 11 115466668 to 115466673 5 + TSS region transcription start site region 3732
Tssr105876 11 115466745 to 115466756 11 + TSS region transcription start site region 105876
Tssr105877 11 115468296 to 115468300 4 + TSS region transcription start site region 105877
Cpgi4135 11 115469344 to 115470085 741 CpG island CpG island 4135