Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:115294539-115394872

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fads6 11 115279622 to 115297663 18041 - protein coding gene fatty acid desaturase domain family, member 6
Cpgi4118 11 115297039 to 115297814 775 CpG island CpG island 4118
Tssr111744 11 115297496 to 115297501 5 - TSS region transcription start site region 111744
Tssr3731 11 115297501 to 115297508 7 - TSS region transcription start site region 3731
Tssr111745 11 115297510 to 115297519 9 - TSS region transcription start site region 111745
Tssr111746 11 115297521 to 115297580 59 - TSS region transcription start site region 111746
Tssr111747 11 115297618 to 115297631 13 - TSS region transcription start site region 111747
Tssr105853 11 115307144 to 115307153 9 + TSS region transcription start site region 105853
Tssr105854 11 115307155 to 115307164 9 + TSS region transcription start site region 105854
Otop2 11 115307163 to 115332303 25140 + protein coding gene otopetrin 2
Tssr105855 11 115307207 to 115307227 20 + TSS region transcription start site region 105855
Ush1g 11 115315192 to 115322041 6849 - protein coding gene USH1 protein network component sans
Cpgi4119 11 115318048 to 115319210 1162 CpG island CpG island 4119
Cpgi4120 11 115320084 to 115320319 235 CpG island CpG island 4120
Cpgi4121 11 115321836 to 115323032 1196 CpG island CpG island 4121
Tssr111748 11 115322025 to 115322064 39 - TSS region transcription start site region 111748
Cpgi4122 11 115323400 to 115323887 487 CpG island CpG island 4122
Tssr105856 11 115323545 to 115323573 28 + TSS region transcription start site region 105856
Cpgi4123 11 115329143 to 115329588 445 CpG island CpG island 4123
Cpgi4124 11 115334402 to 115334888 486 CpG island CpG island 4124
Otop3 11 115334731 to 115346927 12196 + protein coding gene otopetrin 3
Tssr105857 11 115334788 to 115334849 61 + TSS region transcription start site region 105857
Cpgi4125 11 115344539 to 115344872 333 CpG island CpG island 4125
Hid1 11 115347705 to 115367751 20046 - protein coding gene HID1 domain containing
Cpgi4126 11 115366881 to 115367928 1047 CpG island CpG island 4126
Tssr111749 11 115367670 to 115367679 9 - TSS region transcription start site region 111749
Tssr111750 11 115367687 to 115367734 47 - TSS region transcription start site region 111750
Cpgi4127 11 115374094 to 115374602 508 CpG island CpG island 4127
Cpgi4128 11 115381454 to 115382689 1235 CpG island CpG island 4128
Tssr105858 11 115381867 to 115381899 32 + TSS region transcription start site region 105858
Tssr105859 11 115381906 to 115381933 27 + TSS region transcription start site region 105859
Cdr2l 11 115381916 to 115396132 14216 + protein coding gene cerebellar degeneration-related protein 2-like
Cpgi4129 11 115393355 to 115394205 850 CpG island CpG island 4129
Tssr105860 11 115394636 to 115394642 6 + TSS region transcription start site region 105860