Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:113687472-113907476

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D11Wsu47e 11 113684412 to 113694647 10235 + protein coding gene DNA segment, Chr 11, Wayne State University 47, expressed
Tssr105764 11 113687763 to 113687767 4 + TSS region transcription start site region 105764
Cpsf4l 11 113698172 to 113710017 11845 - protein coding gene cleavage and polyadenylation specific factor 4-like
Tssr105765 11 113700200 to 113700206 6 + TSS region transcription start site region 105765
Tssr111640 11 113708952 to 113708972 20 - TSS region transcription start site region 111640
Tssr111641 11 113709521 to 113709528 7 - TSS region transcription start site region 111641
Tssr111642 11 113709653 to 113709690 37 - TSS region transcription start site region 111642
Tssr111643 11 113710012 to 113710023 11 - TSS region transcription start site region 111643
Tssr111644 11 113710053 to 113710061 8 - TSS region transcription start site region 111644
Tssr111645 11 113710098 to 113710105 7 - TSS region transcription start site region 111645
Tssr111646 11 113710108 to 113710113 5 - TSS region transcription start site region 111646
Cdc42ep4 11 113726850 to 113751881 25031 - protein coding gene CDC42 effector protein (Rho GTPase binding) 4
Cpgi4081 11 113750629 to 113752197 1568 CpG island CpG island 4081
Tssr111647 11 113750783 to 113750847 64 - TSS region transcription start site region 111647
Tssr111648 11 113750881 to 113750901 20 - TSS region transcription start site region 111648
Tssr111649 11 113751251 to 113751294 43 - TSS region transcription start site region 111649
Tssr111650 11 113751309 to 113751327 18 - TSS region transcription start site region 111650
Tssr111651 11 113751784 to 113751806 22 - TSS region transcription start site region 111651
Tssr111652 11 113751813 to 113751849 36 - TSS region transcription start site region 111652
Tssr105766 11 113751976 to 113751997 21 + TSS region transcription start site region 105766
Tssr111653 11 113752314 to 113752349 35 - TSS region transcription start site region 111653
Gm11736 11 113756702 to 113757206 504 + pseudogene predicted gene 11736
Tssr111654 11 113771513 to 113771516 3 - TSS region transcription start site region 111654
Sdk2 11 113776374 to 114067046 290672 - protein coding gene sidekick cell adhesion molecule 2
Gm39468 11 113785851 to 113787695 1844 + lncRNA gene predicted gene, 39468
Tssr105767 11 113786159 to 113786204 45 + TSS region transcription start site region 105767
Tssr111655 11 113797472 to 113797476 4 - TSS region transcription start site region 111655
Tssr111656 11 113803642 to 113803692 50 - TSS region transcription start site region 111656
Cpgi4082 11 113828352 to 113828550 198 CpG island CpG island 4082
Cpgi4083 11 113902955 to 113903160 205 CpG island CpG island 4083