Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:110991100-111561931

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kcnj16 11 110968033 to 111027968 59935 + protein coding gene potassium inwardly-rectifying channel, subfamily J, member 16
Tssr105721 11 110997054 to 110997062 8 + TSS region transcription start site region 105721
Tssr105722 11 110997085 to 110997097 12 + TSS region transcription start site region 105722
Tssr105723 11 110997493 to 110997504 11 + TSS region transcription start site region 105723
Tssr105724 11 110997509 to 110997542 33 + TSS region transcription start site region 105724
Tssr105725 11 110997544 to 110997552 8 + TSS region transcription start site region 105725
Tssr105726 11 111023853 to 111023871 18 + TSS region transcription start site region 105726
Tssr105727 11 111026672 to 111026682 10 + TSS region transcription start site region 105727
Tssr105728 11 111026772 to 111026783 11 + TSS region transcription start site region 105728
Tssr105729 11 111026877 to 111026888 11 + TSS region transcription start site region 105729
Tssr105730 11 111026898 to 111026909 11 + TSS region transcription start site region 105730
Tssr105731 11 111026929 to 111026950 21 + TSS region transcription start site region 105731
Tssr105732 11 111027020 to 111027031 11 + TSS region transcription start site region 105732
Tssr105733 11 111027245 to 111027256 11 + TSS region transcription start site region 105733
Tssr105734 11 111027457 to 111027501 44 + TSS region transcription start site region 105734
Cpgi4069 11 111065254 to 111065444 190 CpG island CpG island 4069
Tssr105735 11 111065925 to 111065945 20 + TSS region transcription start site region 105735
Cpgi4070 11 111065935 to 111066325 390 CpG island CpG island 4070
Tssr111606 11 111066056 to 111066077 21 - TSS region transcription start site region 111606
Tssr105736 11 111066154 to 111066174 20 + TSS region transcription start site region 105736
Kcnj2 11 111066164 to 111076821 10657 + protein coding gene potassium inwardly-rectifying channel, subfamily J, member 2
Tssr105737 11 111066183 to 111066188 5 + TSS region transcription start site region 105737
Tssr105738 11 111073717 to 111073739 22 + TSS region transcription start site region 105738
Tssr105739 11 111073778 to 111073792 14 + TSS region transcription start site region 105739
Tssr105740 11 111073932 to 111073936 4 + TSS region transcription start site region 105740
Tssr105741 11 111075431 to 111075444 13 + TSS region transcription start site region 105741
Tssr105742 11 111075451 to 111075472 21 + TSS region transcription start site region 105742
Tssr105743 11 111276053 to 111276078 25 + TSS region transcription start site region 105743
Gm11675 11 111276100 to 111276931 831 + pseudogene predicted gene 11675
D11Mit361 11 111407465 to 111407553 88 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 361
Tssr111607 11 111427998 to 111428019 21 - TSS region transcription start site region 111607
D11Mit202 11 111443224 to 111443422 198 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 202
D11Dcr24 11 111443320 to 111443420 100 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 24
Gm30158 11 111511565 to 111512514 949 - lncRNA gene predicted gene, 30158
Tssr111608 11 111512454 to 111512473 19 - TSS region transcription start site region 111608