Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:107006299-107156317

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39424 11 107010191 to 107013077 2886 + lncRNA gene predicted gene, 39424
Cpgi4031 11 107012603 to 107012969 366 CpG island CpG island 4031
Tssr111434 11 107012682 to 107012729 47 - TSS region transcription start site region 111434
n-TRccg1 11 107012866 to 107012938 72 + tRNA gene nuclear encoded tRNA arginine 1 (anticodon CCG)
Tssr105562 11 107012901 to 107012905 4 + TSS region transcription start site region 105562
Tssr111435 11 107015676 to 107015680 4 - TSS region transcription start site region 111435
Tssr105563 11 107022736 to 107022743 7 + TSS region transcription start site region 105563
Tssr105564 11 107025587 to 107025598 11 + TSS region transcription start site region 105564
Tssr105565 11 107025604 to 107025630 26 + TSS region transcription start site region 105565
1810010H24Rik 11 107025681 to 107030443 4762 + protein coding gene RIKEN cDNA 1810010H24 gene
Cpgi4032 11 107025689 to 107026307 618 CpG island CpG island 4032
Tssr105566 11 107025853 to 107025892 39 + TSS region transcription start site region 105566
Tssr105567 11 107026050 to 107026073 23 + TSS region transcription start site region 105567
Gm36273 11 107026883 to 107027739 856 - lncRNA gene predicted gene, 36273
Cpgi4033 11 107027621 to 107028713 1092 CpG island CpG island 4033
Cpgi4034 11 107029596 to 107029829 233 CpG island CpG island 4034
Bptf 11 107033081 to 107131922 98841 - protein coding gene bromodomain PHD finger transcription factor
Tssr111436 11 107080834 to 107080859 25 - TSS region transcription start site region 111436
Tssr111437 11 107081299 to 107081317 18 - TSS region transcription start site region 111437
Gm4098 11 107100789 to 107105384 4595 pseudogene predicted gene 4098
Cpgi4035 11 107131128 to 107132741 1613 CpG island CpG island 4035
Tssr111438 11 107131497 to 107131540 43 - TSS region transcription start site region 111438
Tssr111439 11 107131889 to 107131900 11 - TSS region transcription start site region 111439
Tssr111440 11 107131943 to 107131954 11 - TSS region transcription start site region 111440
Tssr111441 11 107132114 to 107132166 52 - TSS region transcription start site region 111441
Tssr111442 11 107132173 to 107132201 28 - TSS region transcription start site region 111442
Tssr111443 11 107132644 to 107132661 17 - TSS region transcription start site region 111443
Tssr111444 11 107137718 to 107137743 25 - TSS region transcription start site region 111444
Tssr105568 11 107137794 to 107137840 46 + TSS region transcription start site region 105568