MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:107001050-107051073

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm11708	11	107003912 to 107004740	828	-	pseudogene	predicted gene 11708
Gm39424	11	107010191 to 107013077	2886	+	lncRNA gene	predicted gene, 39424
Cpgi4031	11	107012603 to 107012969	366		CpG island	CpG island 4031
Tssr111434	11	107012682 to 107012729	47	-	TSS region	transcription start site region 111434
n-TRccg1	11	107012866 to 107012938	72	+	tRNA gene	nuclear encoded tRNA arginine 1 (anticodon CCG)
Tssr105562	11	107012901 to 107012905	4	+	TSS region	transcription start site region 105562
Tssr111435	11	107015676 to 107015680	4	-	TSS region	transcription start site region 111435
Tssr105563	11	107022736 to 107022743	7	+	TSS region	transcription start site region 105563
Tssr105564	11	107025587 to 107025598	11	+	TSS region	transcription start site region 105564
Tssr105565	11	107025604 to 107025630	26	+	TSS region	transcription start site region 105565
1810010H24Rik	11	107025681 to 107030443	4762	+	protein coding gene	RIKEN cDNA 1810010H24 gene
Cpgi4032	11	107025689 to 107026307	618		CpG island	CpG island 4032
Tssr105566	11	107025853 to 107025892	39	+	TSS region	transcription start site region 105566
Tssr105567	11	107026050 to 107026073	23	+	TSS region	transcription start site region 105567
Gm36273	11	107026883 to 107027739	856	-	lncRNA gene	predicted gene, 36273
Cpgi4033	11	107027621 to 107028713	1092		CpG island	CpG island 4033
Cpgi4034	11	107029596 to 107029829	233		CpG island	CpG island 4034
Bptf	11	107033081 to 107131922	98841	-	protein coding gene	bromodomain PHD finger transcription factor