Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:104416613-104567024

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kansl1 11 104333229 to 104468861 135632 - protein coding gene KAT8 regulatory NSL complex subunit 1
Tssr111237 11 104417028 to 104417052 24 - TSS region transcription start site region 111237
Gm47315 11 104425156 to 104425300 144 - miRNA gene predicted gene, 47315
D030002E05Rik 11 104437697 to 104440950 3253 unclassified gene RIKEN cDNA D030002E05 gene
Cpgi3990 11 104441487 to 104443134 1647 CpG island CpG island 3990
Tssr111238 11 104441740 to 104441795 55 - TSS region transcription start site region 111238
Tssr111239 11 104441804 to 104441870 66 - TSS region transcription start site region 111239
Tssr111240 11 104442232 to 104442291 59 - TSS region transcription start site region 111240
Tssr111241 11 104442309 to 104442327 18 - TSS region transcription start site region 111241
Tssr111242 11 104442332 to 104442380 48 - TSS region transcription start site region 111242
Tssr105392 11 104442474 to 104442490 16 + TSS region transcription start site region 105392
Tssr111243 11 104443506 to 104443518 12 - TSS region transcription start site region 111243
Tssr111244 11 104464808 to 104464814 6 - TSS region transcription start site region 111244
Cpgi3991 11 104468679 to 104469840 1161 CpG island CpG island 3991
Tssr111245 11 104469432 to 104469467 35 - TSS region transcription start site region 111245
Gm11660 11 104491613 to 104492024 411 + pseudogene predicted gene 11660
Cdc27 11 104502745 to 104550620 47875 - protein coding gene cell division cycle 27
Tssr111246 11 104503232 to 104503253 21 - TSS region transcription start site region 111246
Tssr111247 11 104503442 to 104503445 3 - TSS region transcription start site region 111247
Tssr111248 11 104503508 to 104503536 28 - TSS region transcription start site region 111248
Tssr111249 11 104503677 to 104503725 48 - TSS region transcription start site region 111249
Tssr105393 11 104527074 to 104527081 7 + TSS region transcription start site region 105393
Tssr111250 11 104545922 to 104545927 5 - TSS region transcription start site region 111250
Cpgi3992 11 104549941 to 104550856 915 CpG island CpG island 3992
Tssr105394 11 104550125 to 104550152 27 + TSS region transcription start site region 105394
Tssr111251 11 104550410 to 104550419 9 - TSS region transcription start site region 111251
Tssr111252 11 104550460 to 104550560 100 - TSS region transcription start site region 111252
Myl4 11 104550529 to 104587219 36690 + protein coding gene myosin, light polypeptide 4
Tssr111253 11 104550586 to 104550590 4 - TSS region transcription start site region 111253
Tssr111254 11 104550616 to 104550623 7 - TSS region transcription start site region 111254
Tssr105395 11 104550682 to 104550685 3 + TSS region transcription start site region 105395
Tssr105396 11 104550688 to 104550699 11 + TSS region transcription start site region 105396
Tssr105397 11 104550783 to 104550792 9 + TSS region transcription start site region 105397
Gm11665 11 104556789 to 104557777 988 - antisense lncRNA gene predicted gene 11665
Gm22000 11 104557922 to 104565661 7739 - unclassified non-coding RNA gene predicted gene 22000
Gm11661 11 104565549 to 104566714 1165 - pseudogene predicted gene 11661