Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:104151574-104311577

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Crhr1 11 104132855 to 104175523 42668 + protein coding gene corticotropin releasing hormone receptor 1
Gm35469 11 104145791 to 104159202 13411 - lncRNA gene predicted gene, 35469
Cpgi3983 11 104157883 to 104158139 256 CpG island CpG island 3983
Tssr3694 11 104160606 to 104160608 2 + TSS region transcription start site region 3694
Cpgi3984 11 104169762 to 104170292 530 CpG island CpG island 3984
Sppl2c 11 104186327 to 104191163 4836 + protein coding gene signal peptide peptidase 2C
Tssr105371 11 104186345 to 104186358 13 + TSS region transcription start site region 105371
Tssr105372 11 104191000 to 104191004 4 + TSS region transcription start site region 105372
Cpgi3985 11 104230972 to 104233231 2259 CpG island CpG island 3985
Mapt 11 104231390 to 104332090 100700 + protein coding gene microtubule-associated protein tau
Tssr105373 11 104231442 to 104231453 11 + TSS region transcription start site region 105373
Tssr105374 11 104231465 to 104231507 42 + TSS region transcription start site region 105374
Tssr105375 11 104231517 to 104231528 11 + TSS region transcription start site region 105375
Tssr3695 11 104231528 to 104231539 11 + TSS region transcription start site region 3695
Tssr105376 11 104231574 to 104231577 3 + TSS region transcription start site region 105376
Cpgi3986 11 104233796 to 104234135 339 CpG island CpG island 3986
Gm11659 11 104250902 to 104259361 8459 - antisense lncRNA gene predicted gene 11659
Gm22743 11 104251012 to 104251144 132 - snoRNA gene predicted gene, 22743
Gm47310 11 104251078 to 104251148 70 - miRNA gene predicted gene, 47310
Cpgi3987 11 104278282 to 104278503 221 CpG island CpG island 3987
Tssr105377 11 104282371 to 104282392 21 + TSS region transcription start site region 105377
Cpgi3988 11 104287124 to 104287467 343 CpG island CpG island 3988
Tssr105378 11 104289604 to 104289619 15 + TSS region transcription start site region 105378
Tssr105379 11 104296011 to 104296059 48 + TSS region transcription start site region 105379
Tssr105380 11 104296463 to 104296468 5 + TSS region transcription start site region 105380
Tssr111227 11 104301353 to 104301366 13 - TSS region transcription start site region 111227
Tssr111228 11 104302391 to 104302412 21 - TSS region transcription start site region 111228
Tssr105381 11 104306640 to 104306654 14 + TSS region transcription start site region 105381
Tssr105382 11 104306687 to 104306698 11 + TSS region transcription start site region 105382
Tssr3696 11 104306717 to 104306724 7 + TSS region transcription start site region 3696
Tssr105383 11 104309695 to 104309710 15 + TSS region transcription start site region 105383
Tssr105384 11 104309808 to 104309813 5 + TSS region transcription start site region 105384
Tssr105385 11 104310328 to 104310341 13 + TSS region transcription start site region 105385
Tssr105386 11 104310387 to 104310417 30 + TSS region transcription start site region 105386
Tssr105387 11 104310480 to 104310491 11 + TSS region transcription start site region 105387