Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:103029816-103179826

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26668 11 102863337 to 103075903 212566 + lincRNA gene predicted gene, 26668
Nmt1 11 103028344 to 103066111 37767 + protein coding gene N-myristoyltransferase 1
Tssr105299 11 103042984 to 103042993 9 + TSS region transcription start site region 105299
Tssr105300 11 103043013 to 103043034 21 + TSS region transcription start site region 105300
Tssr105301 11 103043159 to 103043183 24 + TSS region transcription start site region 105301
Gm42090 11 103047674 to 103049695 2021 + lncRNA gene predicted gene, 42090
Tssr105302 11 103056878 to 103056891 13 + TSS region transcription start site region 105302
Plcd3 11 103070304 to 103101658 31354 - protein coding gene phospholipase C, delta 3
Cpgi3950 11 103080002 to 103081079 1077 CpG island CpG island 3950
Cpgi3951 11 103100995 to 103103423 2428 CpG island CpG island 3951
Tssr111152 11 103101588 to 103101595 7 - TSS region transcription start site region 111152
Tssr111153 11 103101609 to 103101662 53 - TSS region transcription start site region 111153
Acbd4 11 103101688 to 103112199 10511 + protein coding gene acyl-Coenzyme A binding domain containing 4
Tssr105303 11 103101689 to 103101726 37 + TSS region transcription start site region 105303
Tssr105304 11 103101735 to 103101749 14 + TSS region transcription start site region 105304
Tssr105305 11 103103015 to 103103026 11 + TSS region transcription start site region 105305
Tssr105306 11 103103051 to 103103115 64 + TSS region transcription start site region 105306
Tssr105307 11 103104755 to 103104768 13 + TSS region transcription start site region 105307
Tssr105308 11 103104771 to 103104791 20 + TSS region transcription start site region 105308
Tssr105309 11 103104794 to 103104811 17 + TSS region transcription start site region 105309
Tssr3688 11 103104816 to 103104826 10 + TSS region transcription start site region 3688
Cpgi3952 11 103112060 to 103112393 333 CpG island CpG island 3952
Cpgi3953 11 103115127 to 103115458 331 CpG island CpG island 3953
Tssr111154 11 103115398 to 103115423 25 - TSS region transcription start site region 111154
Cpgi3954 11 103115929 to 103118030 2101 CpG island CpG island 3954
Tssr105310 11 103116228 to 103116235 7 + TSS region transcription start site region 105310
Hexim1 11 103116325 to 103119725 3400 + protein coding gene hexamethylene bis-acetamide inducible 1
C130045F17Rik 11 103125187 to 103131038 5851 unclassified gene RIKEN cDNA C130045F17 gene
Tssr111155 11 103131812 to 103131817 5 - TSS region transcription start site region 111155
Cpgi3955 11 103132151 to 103133343 1192 CpG island CpG island 3955
Hexim2 11 103132429 to 103139876 7447 + protein coding gene hexamethylene bis-acetamide inducible 2
Tssr111156 11 103132853 to 103132918 65 - TSS region transcription start site region 111156
Tssr105311 11 103133171 to 103133180 9 + TSS region transcription start site region 105311
Tssr105312 11 103133303 to 103133332 29 + TSS region transcription start site region 105312
Tssr105313 11 103133333 to 103133359 26 + TSS region transcription start site region 105313
Tssr105314 11 103133363 to 103133376 13 + TSS region transcription start site region 105314
Tssr105315 11 103134031 to 103134045 14 + TSS region transcription start site region 105315
D11Mit331 11 103139751 to 103139865 114 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 331
Cpgi3956 11 103159076 to 103159376 300 CpG island CpG island 3956
Tssr105316 11 103170416 to 103170427 11 + TSS region transcription start site region 105316
Tssr105317 11 103170493 to 103170496 3 + TSS region transcription start site region 105317
Cpgi3957 11 103170547 to 103171793 1246 CpG island CpG island 3957
Tssr105318 11 103170727 to 103170740 13 + TSS region transcription start site region 105318
Tssr105319 11 103170757 to 103170830 73 + TSS region transcription start site region 105319
Tssr105320 11 103170846 to 103170861 15 + TSS region transcription start site region 105320
Tssr105321 11 103170963 to 103170978 15 + TSS region transcription start site region 105321
Tssr105322 11 103170992 to 103171009 17 + TSS region transcription start site region 105322
Tssr105323 11 103171081 to 103171122 41 + TSS region transcription start site region 105323
Fmnl1 11 103171107 to 103198901 27794 + protein coding gene formin-like 1
Tssr111157 11 103174896 to 103174907 11 - TSS region transcription start site region 111157