Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:102982674-103114695

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26668 11 102863337 to 103075903 212566 + lincRNA gene predicted gene, 26668
Cpgi3947 11 102989666 to 102990688 1022 CpG island CpG island 3947
Gm34620 11 102989944 to 102995757 5813 + lncRNA gene predicted gene, 34620
Dcakd 11 102994047 to 103028239 34192 - protein coding gene dephospho-CoA kinase domain containing
Tssr111130 11 102994310 to 102994328 18 - TSS region transcription start site region 111130
Tssr111131 11 102994674 to 102994695 21 - TSS region transcription start site region 111131
Tssr111132 11 102994704 to 102994735 31 - TSS region transcription start site region 111132
Tssr111133 11 102994879 to 102994915 36 - TSS region transcription start site region 111133
Tssr111134 11 102994949 to 102994966 17 - TSS region transcription start site region 111134
Tssr111135 11 102995005 to 102995041 36 - TSS region transcription start site region 111135
Tssr111136 11 102997405 to 102997444 39 - TSS region transcription start site region 111136
Tssr111137 11 102997525 to 102997542 17 - TSS region transcription start site region 111137
Tssr111138 11 102997556 to 102997568 12 - TSS region transcription start site region 111138
Tssr111139 11 102997586 to 102997597 11 - TSS region transcription start site region 111139
Tssr111140 11 102997601 to 102997618 17 - TSS region transcription start site region 111140
Gm9778 11 102999108 to 103000650 1542 protein coding gene predicted gene 9778
Tssr111141 11 102999796 to 102999810 14 - TSS region transcription start site region 111141
Tssr111142 11 102999828 to 102999840 12 - TSS region transcription start site region 111142
Tssr111143 11 102999843 to 102999854 11 - TSS region transcription start site region 111143
Mir6931 11 102999848 to 102999921 73 - miRNA gene microRNA 6931
Tssr111144 11 103001891 to 103001895 4 - TSS region transcription start site region 111144
Cpgi3948 11 103016579 to 103017453 874 CpG island CpG island 3948
Tssr111145 11 103017073 to 103017152 79 - TSS region transcription start site region 111145
Tssr111146 11 103017167 to 103017179 12 - TSS region transcription start site region 111146
Tssr111147 11 103018711 to 103018716 5 - TSS region transcription start site region 111147
Tssr105296 11 103027844 to 103027862 18 + TSS region transcription start site region 105296
Cpgi3949 11 103028173 to 103028830 657 CpG island CpG island 3949
Tssr111148 11 103028188 to 103028203 15 - TSS region transcription start site region 111148
Tssr111149 11 103028204 to 103028291 87 - TSS region transcription start site region 111149
Tssr105297 11 103028327 to 103028368 41 + TSS region transcription start site region 105297
Tssr111150 11 103028328 to 103028340 12 - TSS region transcription start site region 111150
Nmt1 11 103028344 to 103066111 37767 + protein coding gene N-myristoyltransferase 1
Tssr111151 11 103028345 to 103028364 19 - TSS region transcription start site region 111151
Tssr105298 11 103028542 to 103028573 31 + TSS region transcription start site region 105298
Tssr105299 11 103042984 to 103042993 9 + TSS region transcription start site region 105299
Tssr105300 11 103043013 to 103043034 21 + TSS region transcription start site region 105300
Tssr105301 11 103043159 to 103043183 24 + TSS region transcription start site region 105301
Gm42090 11 103047674 to 103049695 2021 + lncRNA gene predicted gene, 42090
Tssr105302 11 103056878 to 103056891 13 + TSS region transcription start site region 105302
Plcd3 11 103070304 to 103101658 31354 - protein coding gene phospholipase C, delta 3
Cpgi3950 11 103080002 to 103081079 1077 CpG island CpG island 3950
Cpgi3951 11 103100995 to 103103423 2428 CpG island CpG island 3951
Tssr111152 11 103101588 to 103101595 7 - TSS region transcription start site region 111152
Tssr111153 11 103101609 to 103101662 53 - TSS region transcription start site region 111153
Acbd4 11 103101688 to 103112199 10511 + protein coding gene acyl-Coenzyme A binding domain containing 4
Tssr105303 11 103101689 to 103101726 37 + TSS region transcription start site region 105303
Tssr105304 11 103101735 to 103101749 14 + TSS region transcription start site region 105304
Tssr105305 11 103103015 to 103103026 11 + TSS region transcription start site region 105305
Tssr105306 11 103103051 to 103103115 64 + TSS region transcription start site region 105306
Tssr105307 11 103104755 to 103104768 13 + TSS region transcription start site region 105307
Tssr105308 11 103104771 to 103104791 20 + TSS region transcription start site region 105308
Tssr105309 11 103104794 to 103104811 17 + TSS region transcription start site region 105309
Tssr3688 11 103104816 to 103104826 10 + TSS region transcription start site region 3688
Cpgi3952 11 103112060 to 103112393 333 CpG island CpG island 3952