Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:101993146-102093182

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mpp3 11 101999652 to 102027045 27393 - protein coding gene membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
Cpgi3895 11 102026288 to 102027420 1132 CpG island CpG island 3895
Tssr110985 11 102026878 to 102026902 24 - TSS region transcription start site region 110985
Tssr110986 11 102026924 to 102026962 38 - TSS region transcription start site region 110986
E130111B04Rik 11 102030268 to 102035084 4816 - antisense lncRNA gene RIKEN cDNA E130111B04 gene
Tssr105173 11 102041501 to 102041506 5 + TSS region transcription start site region 105173
Cd300lg 11 102041511 to 102055617 14106 + protein coding gene CD300 molecule like family member G
Tssr105174 11 102041520 to 102041531 11 + TSS region transcription start site region 105174
Tssr105175 11 102041532 to 102041581 49 + TSS region transcription start site region 105175
Tssr105176 11 102043146 to 102043182 36 + TSS region transcription start site region 105176
Gm39393 11 102049346 to 102052918 3572 - lncRNA gene predicted gene, 39393
Tssr105177 11 102050171 to 102050192 21 + TSS region transcription start site region 105177
Tssr110987 11 102051684 to 102051706 22 - TSS region transcription start site region 110987
Mpp2 11 102057015 to 102088515 31500 - protein coding gene membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
Cpgi3896 11 102060699 to 102060968 269 CpG island CpG island 3896
Cpgi3897 11 102061441 to 102061618 177 CpG island CpG island 3897
Cpgi3898 11 102082342 to 102082517 175 CpG island CpG island 3898
Tssr110988 11 102082464 to 102082493 29 - TSS region transcription start site region 110988
Cpgi3899 11 102087078 to 102087760 682 CpG island CpG island 3899
Cpgi3900 11 102088056 to 102088830 774 CpG island CpG island 3900
Tssr110989 11 102088439 to 102088470 31 - TSS region transcription start site region 110989
Tssr110990 11 102088471 to 102088530 59 - TSS region transcription start site region 110990
Tssr110991 11 102088540 to 102088554 14 - TSS region transcription start site region 110991