Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:101463764-101576955

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vat1 11 101458748 to 101466199 7451 - protein coding gene vesicle amine transport 1
Cpgi3872 11 101464984 to 101466427 1443 CpG island CpG island 3872
Tssr110946 11 101465190 to 101465222 32 - TSS region transcription start site region 110946
Tssr105126 11 101465302 to 101465317 15 + TSS region transcription start site region 105126
Tssr105127 11 101465478 to 101465499 21 + TSS region transcription start site region 105127
Tssr110947 11 101465927 to 101465959 32 - TSS region transcription start site region 110947
Tssr110948 11 101466136 to 101466150 14 - TSS region transcription start site region 110948
Tssr110949 11 101466158 to 101466216 58 - TSS region transcription start site region 110949
Tssr110950 11 101466222 to 101466237 15 - TSS region transcription start site region 110950
Tssr110951 11 101466248 to 101466257 9 - TSS region transcription start site region 110951
Cpgi3873 11 101467253 to 101467427 174 CpG island CpG island 3873
Cpgi3874 11 101467625 to 101469052 1427 CpG island CpG island 3874
Tssr110952 11 101468024 to 101468066 42 - TSS region transcription start site region 110952
Tssr105128 11 101468138 to 101468149 11 + TSS region transcription start site region 105128
Tssr105129 11 101468164 to 101468175 11 + TSS region transcription start site region 105129
Tssr105130 11 101468181 to 101468192 11 + TSS region transcription start site region 105130
Tssr105131 11 101468200 to 101468235 35 + TSS region transcription start site region 105131
Tssr105132 11 101468236 to 101468249 13 + TSS region transcription start site region 105132
Tssr105133 11 101468333 to 101468354 21 + TSS region transcription start site region 105133
Rnd2 11 101468338 to 101471306 2968 + protein coding gene Rho family GTPase 2
Tssr105134 11 101468355 to 101468373 18 + TSS region transcription start site region 105134
Tssr105135 11 101469376 to 101469382 6 + TSS region transcription start site region 105135
Gm11625 11 101476226 to 101476521 295 + pseudogene predicted gene 11625
Brca1 11 101488764 to 101551955 63191 - protein coding gene breast cancer 1, early onset
D11Mit200 11 101545590 to 101545714 124 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 200
Cpgi3875 11 101551540 to 101553014 1474 CpG island CpG island 3875
Tssr110953 11 101551837 to 101551893 56 - TSS region transcription start site region 110953
Tssr105136 11 101552135 to 101552184 49 + TSS region transcription start site region 105136
Nbr1 11 101552149 to 101581951 29802 + protein coding gene NBR1, autophagy cargo receptor
Tssr105137 11 101552188 to 101552207 19 + TSS region transcription start site region 105137
Tssr105138 11 101552391 to 101552426 35 + TSS region transcription start site region 105138
Tssr105139 11 101552849 to 101552874 25 + TSS region transcription start site region 105139
Tssr105140 11 101553808 to 101553824 16 + TSS region transcription start site region 105140
D11Mit125 11 101558861 to 101559079 218 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 125