Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:101120328-101240493

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi3847 11 101119157 to 101120736 1579 CpG island CpG island 3847
Tubg1 11 101120068 to 101126419 6351 + protein coding gene tubulin, gamma 1
Tssr105048 11 101123439 to 101123465 26 + TSS region transcription start site region 105048
Cpgi3848 11 101140266 to 101140651 385 CpG island CpG island 3848
Gm27626 11 101140454 to 101140509 55 - miRNA gene predicted gene, 27626
D11Mit359 11 101141096 to 101141215 119 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 359
Cpgi3849 11 101155685 to 101156401 716 CpG island CpG island 3849
Tssr105049 11 101155884 to 101155921 37 + TSS region transcription start site region 105049
Tubg2 11 101155907 to 101161787 5880 + protein coding gene tubulin, gamma 2
Tssr105050 11 101155968 to 101156040 72 + TSS region transcription start site region 105050
Plekhh3 11 101162679 to 101171351 8672 - protein coding gene pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
Cpgi3850 11 101163528 to 101164813 1285 CpG island CpG island 3850
Cpgi3851 11 101170214 to 101171516 1302 CpG island CpG island 3851
Tssr110915 11 101170327 to 101170334 7 - TSS region transcription start site region 110915
Tssr110916 11 101171196 to 101171207 11 - TSS region transcription start site region 110916
Tssr110917 11 101171302 to 101171353 51 - TSS region transcription start site region 110917
Cpgi3852 11 101171971 to 101172544 573 CpG island CpG island 3852
Ccr10 11 101172998 to 101175443 2445 - protein coding gene chemokine (C-C motif) receptor 10
Cpgi3853 11 101173445 to 101174633 1188 CpG island CpG island 3853
Cntnap1 11 101174649 to 101190723 16074 + protein coding gene contactin associated protein-like 1
Tssr110918 11 101175440 to 101175444 4 - TSS region transcription start site region 110918
Cpgi3854 11 101176127 to 101176617 490 CpG island CpG island 3854
Tssr3674 11 101176193 to 101176247 54 + TSS region transcription start site region 3674
Cpgi3855 11 101177974 to 101178372 398 CpG island CpG island 3855
Tssr105051 11 101180094 to 101180101 7 + TSS region transcription start site region 105051
Cpgi3856 11 101180328 to 101180493 165 CpG island CpG island 3856
Tssr105052 11 101181329 to 101181378 49 + TSS region transcription start site region 105052
Cpgi3857 11 101186526 to 101186725 199 CpG island CpG island 3857
Tssr105053 11 101188274 to 101188303 29 + TSS region transcription start site region 105053
Ezh1 11 101191115 to 101226463 35348 - protein coding gene enhancer of zeste 1 polycomb repressive complex 2 subunit
Cpgi3858 11 101225855 to 101226685 830 CpG island CpG island 3858
Tssr110919 11 101226414 to 101226455 41 - TSS region transcription start site region 110919
Tssr110920 11 101232294 to 101232335 41 - TSS region transcription start site region 110920