Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:100580165-100660209

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cnp 11 100574909 to 100591418 16509 + protein coding gene 2',3'-cyclic nucleotide 3' phosphodiesterase
Tssr104947 11 100580789 to 100580814 25 + TSS region transcription start site region 104947
Tssr104948 11 100580828 to 100580851 23 + TSS region transcription start site region 104948
Tssr104949 11 100580884 to 100580889 5 + TSS region transcription start site region 104949
Tssr104950 11 100581283 to 100581298 15 + TSS region transcription start site region 104950
Dnajc7 11 100582818 to 100620168 37350 - protein coding gene DnaJ heat shock protein family (Hsp40) member C7
Tssr110830 11 100583090 to 100583097 7 - TSS region transcription start site region 110830
Tssr110831 11 100583112 to 100583129 17 - TSS region transcription start site region 110831
Tssr110832 11 100584694 to 100584706 12 - TSS region transcription start site region 110832
Tssr110833 11 100584715 to 100584727 12 - TSS region transcription start site region 110833
Tssr110834 11 100584746 to 100584780 34 - TSS region transcription start site region 110834
Tssr110835 11 100591501 to 100591519 18 - TSS region transcription start site region 110835
Tssr110836 11 100610069 to 100610072 3 - TSS region transcription start site region 110836
Tssr110837 11 100613334 to 100613368 34 - TSS region transcription start site region 110837
Tssr110838 11 100613384 to 100613389 5 - TSS region transcription start site region 110838
Tssr110839 11 100613391 to 100613400 9 - TSS region transcription start site region 110839
Tssr110840 11 100613402 to 100613407 5 - TSS region transcription start site region 110840
Cpgi3821 11 100618887 to 100620092 1205 CpG island CpG island 3821
Tssr104951 11 100619217 to 100619283 66 + TSS region transcription start site region 104951
Tssr110841 11 100619593 to 100619596 3 - TSS region transcription start site region 110841
Tssr110842 11 100619598 to 100619657 59 - TSS region transcription start site region 110842
Tssr110843 11 100619674 to 100619685 11 - TSS region transcription start site region 110843
Tssr104952 11 100619729 to 100619760 31 + TSS region transcription start site region 104952
Nkiras2 11 100619856 to 100627610 7754 + protein coding gene NFKB inhibitor interacting Ras-like protein 2
Tssr110844 11 100620165 to 100620209 44 - TSS region transcription start site region 110844
Cpgi3822 11 100622692 to 100623290 598 CpG island CpG island 3822
Tssr3672 11 100622861 to 100622868 7 + TSS region transcription start site region 3672
Tssr104953 11 100622870 to 100622881 11 + TSS region transcription start site region 104953
Tssr104954 11 100622883 to 100622920 37 + TSS region transcription start site region 104954
Tssr104955 11 100622921 to 100622970 49 + TSS region transcription start site region 104955
Tssr104956 11 100622971 to 100622987 16 + TSS region transcription start site region 104956
Tssr104957 11 100624082 to 100624100 18 + TSS region transcription start site region 104957
Tssr104958 11 100626902 to 100626920 18 + TSS region transcription start site region 104958
Zfp385c 11 100627543 to 100692455 64912 - protein coding gene zinc finger protein 385C
Cpgi3823 11 100639932 to 100640901 969 CpG island CpG island 3823
Gm44544 11 100639944 to 100643117 3173 - pseudogene predicted gene 44544
Tssr110845 11 100650711 to 100650749 38 - TSS region transcription start site region 110845
Cpgi3824 11 100657328 to 100657544 216 CpG island CpG island 3824