Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:100390660-100440964

Filter by:
21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Jup 11 100368958 to 100397763 28805 - protein coding gene junction plakoglobin
Cpgi3810 11 100396889 to 100398047 1158 CpG island CpG island 3810
Tssr110803 11 100397070 to 100397109 39 - TSS region transcription start site region 110803
Tssr110804 11 100397740 to 100397792 52 - TSS region transcription start site region 110804
Tssr3670 11 100397883 to 100397913 30 - TSS region transcription start site region 3670
Tssr3671 11 100400912 to 100400913 1 - TSS region transcription start site region 3671
Gm12348 11 100401508 to 100402252 744 + lncRNA gene predicted gene 12348
P3h4 11 100408748 to 100414819 6071 - protein coding gene prolyl 3-hydroxylase family member 4 (non-enzymatic)
Tssr110805 11 100411886 to 100411895 9 - TSS region transcription start site region 110805
Cpgi3811 11 100413503 to 100415239 1736 CpG island CpG island 3811
Tssr110806 11 100414673 to 100414744 71 - TSS region transcription start site region 110806
Tssr110807 11 100414777 to 100414811 34 - TSS region transcription start site region 110807
Tssr110808 11 100414829 to 100414852 23 - TSS region transcription start site region 110808
Tssr110809 11 100414857 to 100414872 15 - TSS region transcription start site region 110809
Tssr110810 11 100415191 to 100415202 11 - TSS region transcription start site region 110810
Cpgi3812 11 100415660 to 100415964 304 CpG island CpG island 3812
Fkbp10 11 100415697 to 100424824 9127 + protein coding gene FK506 binding protein 10
Tssr104936 11 100415715 to 100415720 5 + TSS region transcription start site region 104936
Tssr104937 11 100415722 to 100415763 41 + TSS region transcription start site region 104937
Nt5c3b 11 100422317 to 100441803 19486 - protein coding gene 5'-nucleotidase, cytosolic IIIB
Cpgi3813 11 100440668 to 100441306 638 CpG island CpG island 3813