MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:100382883-100412913

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11 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Jup	11	100368958 to 100397763	28805	-	protein coding gene	junction plakoglobin
Tssr104935	11	100386179 to 100386205	26	+	TSS region	transcription start site region 104935
Tssr110802	11	100386758 to 100386791	33	-	TSS region	transcription start site region 110802
Cpgi3810	11	100396889 to 100398047	1158		CpG island	CpG island 3810
Tssr110803	11	100397070 to 100397109	39	-	TSS region	transcription start site region 110803
Tssr110804	11	100397740 to 100397792	52	-	TSS region	transcription start site region 110804
Tssr3670	11	100397883 to 100397913	30	-	TSS region	transcription start site region 3670
Tssr3671	11	100400912 to 100400913	1	-	TSS region	transcription start site region 3671
Gm12348	11	100401508 to 100402252	744	+	lncRNA gene	predicted gene 12348
P3h4	11	100408748 to 100414819	6071	-	protein coding gene	prolyl 3-hydroxylase family member 4 (non-enzymatic)
Tssr110805	11	100411886 to 100411895	9	-	TSS region	transcription start site region 110805