Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:97661019-98941253

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epyc 10 97644068 to 97681900 37832 + protein coding gene epiphycan
Tssr95501 10 97674741 to 97674750 9 + TSS region transcription start site region 95501
Gm10754 10 97681414 to 97967090 285676 - lincRNA gene predicted gene 10754
Tssr95502 10 97693020 to 97693029 9 + TSS region transcription start site region 95502
Cpgi2150 10 97693032 to 97694223 1191 CpG island CpG island 2150
Tssr95503 10 97693053 to 97693061 8 + TSS region transcription start site region 95503
Ccer1 10 97693059 to 97694923 1864 + protein coding gene coiled-coil glutamate-rich protein 1
Tssr95504 10 97714734 to 97714751 17 + TSS region transcription start site region 95504
Tssr95505 10 97714767 to 97714789 22 + TSS region transcription start site region 95505
4930525C09Rik 10 97714772 to 97753702 38930 + lincRNA gene RIKEN cDNA 4930525C09 gene
C030005K15Rik 10 97724874 to 97726755 1881 - unclassified gene RIKEN cDNA C030005K15 gene
D10Mit97 10 97738104 to 97738246 142 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 97
Gm25658 10 97744757 to 97744884 127 - snoRNA gene predicted gene, 25658
D10Mit120 10 97932688 to 97932818 130 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 120
D10Mit289 10 98039443 to 98039542 99 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 289
Gm8633 10 98299927 to 98351867 51940 - lincRNA gene predicted gene 8633
Gm48687 10 98301019 to 98301253 234 + pseudogene predicted gene, 48687
Gm37631 10 98486510 to 98486873 363 - unclassified gene predicted gene, 37631
Gm34297 10 98537488 to 98567511 30023 + lincRNA gene predicted gene, 34297
Gm5427 10 98653799 to 98699710 45911 - lincRNA gene predicted gene 5427
Tssr95506 10 98668001 to 98668004 3 + TSS region transcription start site region 95506
Tssr99101 10 98690062 to 98690094 32 - TSS region transcription start site region 99101
Tssr99102 10 98744286 to 98744291 5 - TSS region transcription start site region 99102
Tssr99103 10 98744305 to 98744314 9 - TSS region transcription start site region 99103
Tssr95507 10 98781249 to 98781254 5 + TSS region transcription start site region 95507
D10Mit202 10 98785631 to 98785892 261 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 202
Tssr95508 10 98798911 to 98798922 11 + TSS region transcription start site region 95508
Gm40750 10 98807136 to 98809465 2329 + lncRNA gene predicted gene, 40750
Gm34346 10 98834007 to 98882737 48730 - lncRNA gene predicted gene, 34346
Tssr99104 10 98857092 to 98857096 4 - TSS region transcription start site region 99104
Tssr95509 10 98878065 to 98878073 8 + TSS region transcription start site region 95509
Tssr99105 10 98880113 to 98880142 29 - TSS region transcription start site region 99105
Tssr95510 10 98880354 to 98880379 25 + TSS region transcription start site region 95510
Tssr95511 10 98880390 to 98880402 12 + TSS region transcription start site region 95511
Tssr99106 10 98880806 to 98880818 12 - TSS region transcription start site region 99106
Tssr99107 10 98898005 to 98898028 23 - TSS region transcription start site region 99107
D10Mit290 10 98898947 to 98899069 122 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 290
Cpgi2151 10 98913432 to 98915964 2532 CpG island CpG island 2151
Tssr99108 10 98913766 to 98913770 4 - TSS region transcription start site region 99108
Tssr99109 10 98913948 to 98913953 5 - TSS region transcription start site region 99109
Tssr99110 10 98914155 to 98914168 13 - TSS region transcription start site region 99110
Atp2b1 10 98914406 to 99026143 111737 + protein coding gene ATPase, Ca++ transporting, plasma membrane 1
Tssr95512 10 98914413 to 98914418 5 + TSS region transcription start site region 95512
Tssr95513 10 98914426 to 98914437 11 + TSS region transcription start site region 95513
Tssr95514 10 98914561 to 98914576 15 + TSS region transcription start site region 95514
Tssr95515 10 98914639 to 98914721 82 + TSS region transcription start site region 95515
Tssr99111 10 98914989 to 98915009 20 - TSS region transcription start site region 99111
Tssr95516 10 98915117 to 98915172 55 + TSS region transcription start site region 95516
Tssr95517 10 98915181 to 98915192 11 + TSS region transcription start site region 95517
Tssr95518 10 98916109 to 98916127 18 + TSS region transcription start site region 95518
Tssr95519 10 98917553 to 98917559 6 + TSS region transcription start site region 95519
Tssr95520 10 98920577 to 98920583 6 + TSS region transcription start site region 95520
Tssr95521 10 98921020 to 98921029 9 + TSS region transcription start site region 95521
Tssr95522 10 98931136 to 98931145 9 + TSS region transcription start site region 95522