Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:96023231-96323250

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eea1 10 95940661 to 96045518 104857 + protein coding gene early endosome antigen 1
Tssr95403 10 96023969 to 96023980 11 + TSS region transcription start site region 95403
Tssr95404 10 96026704 to 96026723 19 + TSS region transcription start site region 95404
Tssr95405 10 96028427 to 96028439 12 + TSS region transcription start site region 95405
Tssr95406 10 96036667 to 96036683 16 + TSS region transcription start site region 95406
Tssr95407 10 96037418 to 96037453 35 + TSS region transcription start site region 95407
Tssr95408 10 96039572 to 96039583 11 + TSS region transcription start site region 95408
Tssr95409 10 96044519 to 96044529 10 + TSS region transcription start site region 95409
Gm49817 10 96047628 to 96096005 48377 - pseudogene predicted gene, 49817
Cpgi2146 10 96077528 to 96077679 151 CpG island CpG island 2146
Tssr99071 10 96077560 to 96077585 25 - TSS region transcription start site region 99071
Tssr99072 10 96077741 to 96077747 6 - TSS region transcription start site region 99072
Tssr99073 10 96077808 to 96077826 18 - TSS region transcription start site region 99073
Tssr99074 10 96077886 to 96077897 11 - TSS region transcription start site region 99074
Tssr95410 10 96094369 to 96094382 13 + TSS region transcription start site region 95410
D10Mit119 10 96106200 to 96106342 142 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 119
Gm48425 10 96127985 to 96129742 1757 - pseudogene predicted gene, 48425
Gm5426 10 96136603 to 96136914 311 + pseudogene predicted pseudogene 5426
Tssr99075 10 96163276 to 96163291 15 - TSS region transcription start site region 99075
Tssr99076 10 96163418 to 96163428 10 - TSS region transcription start site region 99076
Tssr95411 10 96163559 to 96163561 2 + TSS region transcription start site region 95411
Gm22913 10 96164331 to 96164431 100 + miRNA gene predicted gene, 22913
Tssr95412 10 96173231 to 96173250 19 + TSS region transcription start site region 95412
Tssr99077 10 96176619 to 96176623 4 - TSS region transcription start site region 99077
Gm40746 10 96180918 to 96182695 1777 + lncRNA gene predicted gene, 40746
Tssr99078 10 96181504 to 96181509 5 - TSS region transcription start site region 99078
Tssr99079 10 96181533 to 96181544 11 - TSS region transcription start site region 99079
Tssr95413 10 96181664 to 96181682 18 + TSS region transcription start site region 95413
Tssr95414 10 96181690 to 96181716 26 + TSS region transcription start site region 95414
Tssr95415 10 96181807 to 96181811 4 + TSS region transcription start site region 95415
Tssr99080 10 96185720 to 96185726 6 - TSS region transcription start site region 99080
Tssr95416 10 96185956 to 96185968 12 + TSS region transcription start site region 95416
Tssr95417 10 96186205 to 96186245 40 + TSS region transcription start site region 95417
Cpgi2147 10 96215622 to 96215811 189 CpG island CpG island 2147
4930459C07Rik 10 96226207 to 96248708 22501 + lincRNA gene RIKEN cDNA 4930459C07 gene
Gm40747 10 96226325 to 96258908 32583 - lncRNA gene predicted gene, 40747
Tssr95418 10 96227810 to 96227826 16 + TSS region transcription start site region 95418
Tssr99081 10 96263697 to 96263732 35 - TSS region transcription start site region 99081
Tssr95419 10 96266631 to 96266640 9 + TSS region transcription start site region 95419
Tssr95420 10 96280569 to 96280583 14 + TSS region transcription start site region 95420
D10Mit291 10 96295775 to 96295899 124 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 291
Gm40748 10 96305501 to 96308732 3231 - lncRNA gene predicted gene, 40748
Tssr99082 10 96306927 to 96306938 11 - TSS region transcription start site region 99082
Gm48427 10 96309345 to 96320725 11380 + lincRNA gene predicted gene, 48427
Gm33782 10 96310131 to 96362367 52236 + lincRNA gene predicted gene, 33782