Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:95283144-96133150

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163 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cradd 10 95174746 to 95324133 149387 - protein coding gene CASP2 and RIPK1 domain containing adaptor with death domain
Tssr99021 10 95298637 to 95298642 5 - TSS region transcription start site region 99021
Gm48880 10 95312870 to 95314853 1983 - unclassified gene predicted gene, 48880
Gm48882 10 95318247 to 95324358 6111 + antisense lncRNA gene predicted gene, 48882
Tssr95353 10 95318457 to 95318467 10 + TSS region transcription start site region 95353
Tssr95354 10 95319270 to 95319283 13 + TSS region transcription start site region 95354
Tssr95355 10 95319291 to 95319301 10 + TSS region transcription start site region 95355
Tssr99022 10 95319996 to 95320014 18 - TSS region transcription start site region 99022
Tssr99023 10 95322979 to 95322985 6 - TSS region transcription start site region 99023
Cpgi2136 10 95323411 to 95324075 664 CpG island CpG island 2136
Tssr99024 10 95323532 to 95323545 13 - TSS region transcription start site region 99024
Tssr99025 10 95323550 to 95323610 60 - TSS region transcription start site region 99025
Tssr99026 10 95323993 to 95324008 15 - TSS region transcription start site region 99026
Tssr99027 10 95324072 to 95324114 42 - TSS region transcription start site region 99027
Tssr99028 10 95324126 to 95324144 18 - TSS region transcription start site region 99028
Tssr99029 10 95324146 to 95324157 11 - TSS region transcription start site region 99029
2310039L15Rik 10 95336276 to 95363216 26940 + lincRNA gene RIKEN cDNA 2310039L15 gene
Cpgi2137 10 95352684 to 95352910 226 CpG island CpG island 2137
Socs2 10 95385362 to 95417180 31818 - protein coding gene suppressor of cytokine signaling 2
Cpgi2138 10 95398492 to 95398873 381 CpG island CpG island 2138
Tssr3329 10 95409029 to 95409032 3 + TSS region transcription start site region 3329
Tssr95356 10 95411762 to 95411776 14 + TSS region transcription start site region 95356
Tssr95357 10 95412026 to 95412048 22 + TSS region transcription start site region 95357
Gm33230 10 95413117 to 95414603 1486 + lncRNA gene predicted gene, 33230
Tssr99030 10 95413593 to 95413601 8 - TSS region transcription start site region 99030
Cpgi2139 10 95414306 to 95417694 3388 CpG island CpG island 2139
Tssr99031 10 95415194 to 95415220 26 - TSS region transcription start site region 99031
Tssr99032 10 95415285 to 95415297 12 - TSS region transcription start site region 99032
Tssr99033 10 95415465 to 95415483 18 - TSS region transcription start site region 99033
Tssr99034 10 95415497 to 95415511 14 - TSS region transcription start site region 99034
Tssr95358 10 95415591 to 95415627 36 + TSS region transcription start site region 95358
Tssr99035 10 95415973 to 95416006 33 - TSS region transcription start site region 99035
Tssr99036 10 95416007 to 95416035 28 - TSS region transcription start site region 99036
Tssr99037 10 95416716 to 95416732 16 - TSS region transcription start site region 99037
Tssr99038 10 95416780 to 95416834 54 - TSS region transcription start site region 99038
Tssr99039 10 95416850 to 95416861 11 - TSS region transcription start site region 99039
Tssr95359 10 95416983 to 95416993 10 + TSS region transcription start site region 95359
Tssr99040 10 95417040 to 95417077 37 - TSS region transcription start site region 99040
Tssr99041 10 95417099 to 95417110 11 - TSS region transcription start site region 99041
Tssr95360 10 95417235 to 95417267 32 + TSS region transcription start site region 95360
Tssr99042 10 95417250 to 95417269 19 - TSS region transcription start site region 99042
Tssr95361 10 95417352 to 95417385 33 + TSS region transcription start site region 95361
5730420D15Rik 10 95417375 to 95428640 11265 + bidirectional promoter lncRNA gene RIKEN cDNA 5730420D15 gene
Tssr95362 10 95418682 to 95418687 5 + TSS region transcription start site region 95362
Gm47599 10 95445316 to 95461224 15908 - lincRNA gene predicted gene, 47599
Tssr99043 10 95447961 to 95447970 9 - TSS region transcription start site region 99043
Tssr99044 10 95447973 to 95448006 33 - TSS region transcription start site region 99044
Gm47600 10 95454672 to 95454966 294 - pseudogene predicted gene, 47600
Tssr95363 10 95456490 to 95456505 15 + TSS region transcription start site region 95363
Cpgi2140 10 95466825 to 95467066 241 CpG island CpG island 2140
Gm3619 10 95477343 to 95478117 774 - pseudogene predicted gene 3619
Mrpl42 10 95480805 to 95501940 21135 - protein coding gene mitochondrial ribosomal protein L42
Tssr99045 10 95494791 to 95494795 4 - TSS region transcription start site region 99045
Cpgi2141 10 95501612 to 95502136 524 CpG island CpG island 2141
Tssr99046 10 95501921 to 95501953 32 - TSS region transcription start site region 99046
Tssr99047 10 95501957 to 95501966 9 - TSS region transcription start site region 99047
Gm46239 10 95512227 to 95514786 2559 - lncRNA gene predicted gene, 46239
Cpgi2142 10 95514347 to 95516021 1674 CpG island CpG island 2142
Tssr99048 10 95514742 to 95514769 27 - TSS region transcription start site region 99048
Tssr99049 10 95514770 to 95514789 19 - TSS region transcription start site region 99049
Tssr95364 10 95514870 to 95514888 18 + TSS region transcription start site region 95364
Tssr95365 10 95514962 to 95514970 8 + TSS region transcription start site region 95365
Tssr95366 10 95515116 to 95515161 45 + TSS region transcription start site region 95366
Ube2n 10 95515162 to 95545658 30496 + protein coding gene ubiquitin-conjugating enzyme E2N
Tssr95367 10 95515170 to 95515180 10 + TSS region transcription start site region 95367
Tssr95368 10 95523184 to 95523191 7 + TSS region transcription start site region 95368
Tssr95369 10 95527166 to 95527169 3 + TSS region transcription start site region 95369
Siim1 10 95545406 to 95545406 0 QTL stress induced immobility 1
Nudt4 10 95547007 to 95564146 17139 - protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 4
Tssr99050 10 95548524 to 95548538 14 - TSS region transcription start site region 99050
Tssr99051 10 95548923 to 95548934 11 - TSS region transcription start site region 99051
Mir3058 10 95559231 to 95559321 90 - miRNA gene microRNA 3058
Cpgi2143 10 95563224 to 95564627 1403 CpG island CpG island 2143
Tssr95370 10 95563866 to 95563871 5 + TSS region transcription start site region 95370
Tssr99052 10 95564021 to 95564028 7 - TSS region transcription start site region 99052
Tssr99053 10 95564034 to 95564062 28 - TSS region transcription start site region 99053
Tssr99054 10 95564065 to 95564091 26 - TSS region transcription start site region 99054
Tssr99055 10 95564099 to 95564121 22 - TSS region transcription start site region 99055
Tssr99056 10 95564135 to 95564154 19 - TSS region transcription start site region 99056
Tssr99057 10 95564173 to 95564181 8 - TSS region transcription start site region 99057
Gm23776 10 95603792 to 95604116 324 + unclassified non-coding RNA gene predicted gene, 23776
Tssr99058 10 95630378 to 95630380 2 - TSS region transcription start site region 99058
Gm33336 10 95630503 to 95632244 1741 - lincRNA gene predicted gene, 33336
Gm47667 10 95634483 to 95636425 1942 + lincRNA gene predicted gene, 47667
Tssr95371 10 95634494 to 95634532 38 + TSS region transcription start site region 95371
Anapc15-ps 10 95672991 to 95673451 460 - pseudogene anaphase prompoting complex C subunit 15, pseudogene
Tssr99059 10 95673464 to 95673485 21 - TSS region transcription start site region 99059
Cpgi2144 10 95680804 to 95680993 189 CpG island CpG island 2144
2310011C19Rik 10 95680806 to 95681123 317 unclassified gene RIKEN cDNA 2310011C19 gene
Gm47669 10 95703051 to 95703462 411 - pseudogene predicted gene, 47669
Tssr95372 10 95708144 to 95708150 6 + TSS region transcription start site region 95372
Gm47671 10 95714001 to 95717507 3506 - lincRNA gene predicted gene, 47671
1110019B22Rik 10 95719133 to 95722500 3367 - lincRNA gene RIKEN cDNA 1110019B22 gene
Tssr99060 10 95722346 to 95722353 7 - TSS region transcription start site region 99060
Tssr99061 10 95722430 to 95722478 48 - TSS region transcription start site region 99061
Gm47708 10 95730183 to 95739356 9173 + lincRNA gene predicted gene, 47708
Tssr95373 10 95730283 to 95730303 20 + TSS region transcription start site region 95373
Tssr95374 10 95730318 to 95730332 14 + TSS region transcription start site region 95374
Tssr95375 10 95730334 to 95730337 3 + TSS region transcription start site region 95375
Tssr95376 10 95746066 to 95746092 26 + TSS region transcription start site region 95376
Tssr3330 10 95766829 to 95766854 25 + TSS region transcription start site region 3330
Tssr99062 10 95767759 to 95767774 15 - TSS region transcription start site region 99062
Tssr99063 10 95768069 to 95768087 18 - TSS region transcription start site region 99063
4732465J04Rik 10 95773133 to 95794984 21851 + lincRNA gene RIKEN cDNA 4732465J04 gene
Tssr99064 10 95773644 to 95773661 17 - TSS region transcription start site region 99064
Tssr95377 10 95773830 to 95773835 5 + TSS region transcription start site region 95377
Tssr95378 10 95778901 to 95778927 26 + TSS region transcription start site region 95378
Tssr99065 10 95778945 to 95778982 37 - TSS region transcription start site region 99065
Tssr95379 10 95778948 to 95778955 7 + TSS region transcription start site region 95379
Tssr99066 10 95779704 to 95779715 11 - TSS region transcription start site region 99066
Tssr95380 10 95779980 to 95779991 11 + TSS region transcription start site region 95380
Tssr95381 10 95782652 to 95782682 30 + TSS region transcription start site region 95381
Tssr95382 10 95801211 to 95801213 2 + TSS region transcription start site region 95382
Tssr3331 10 95808916 to 95808917 1 - TSS region transcription start site region 3331
Gm47718 10 95811337 to 95817895 6558 - lincRNA gene predicted gene, 47718
Gm33377 10 95817321 to 95896811 79490 + lncRNA gene predicted gene, 33377
Gm47719 10 95817570 to 95849118 31548 + lincRNA gene predicted gene, 47719
Gm33543 10 95823973 to 95842930 18957 - lncRNA gene predicted gene, 33543
Tssr99067 10 95825151 to 95825155 4 - TSS region transcription start site region 99067
Tssr99068 10 95842886 to 95842893 7 - TSS region transcription start site region 99068
Tssr99069 10 95842904 to 95842915 11 - TSS region transcription start site region 99069
Tssr99070 10 95842924 to 95842946 22 - TSS region transcription start site region 99070
Gm47724 10 95870483 to 95870799 316 - pseudogene predicted gene, 47724
Tssr95383 10 95892512 to 95892528 16 + TSS region transcription start site region 95383
Gm47725 10 95893443 to 95897257 3814 + lincRNA gene predicted gene, 47725
Tssr95384 10 95893481 to 95893508 27 + TSS region transcription start site region 95384
Gm24433 10 95898603 to 95898735 132 + snoRNA gene predicted gene, 24433
Cpgi2145 10 95940243 to 95941469 1226 CpG island CpG island 2145
Eea1 10 95940661 to 96045518 104857 + protein coding gene early endosome antigen 1
Tssr95385 10 95940681 to 95940703 22 + TSS region transcription start site region 95385
Tssr95386 10 95940704 to 95940772 68 + TSS region transcription start site region 95386
Tssr95387 10 95940858 to 95940875 17 + TSS region transcription start site region 95387
Tssr95388 10 95941054 to 95941071 17 + TSS region transcription start site region 95388
Tssr95389 10 95943438 to 95943443 5 + TSS region transcription start site region 95389
Tssr95390 10 95970854 to 95970863 9 + TSS region transcription start site region 95390
Tssr95391 10 95970914 to 95970923 9 + TSS region transcription start site region 95391
Tssr95392 10 95973989 to 95974002 13 + TSS region transcription start site region 95392
Tssr95393 10 95980322 to 95980334 12 + TSS region transcription start site region 95393
Tssr95394 10 95980340 to 95980355 15 + TSS region transcription start site region 95394
Tssr95395 10 95989558 to 95989573 15 + TSS region transcription start site region 95395
Tssr95396 10 95990278 to 95990287 9 + TSS region transcription start site region 95396
Tssr95397 10 95991371 to 95991383 12 + TSS region transcription start site region 95397
Tssr95398 10 95991604 to 95991626 22 + TSS region transcription start site region 95398
Tssr95399 10 95993420 to 95993433 13 + TSS region transcription start site region 95399
Tssr95400 10 96002902 to 96002922 20 + TSS region transcription start site region 95400
Tssr95401 10 96012120 to 96012129 9 + TSS region transcription start site region 95401
Tssr95402 10 96019861 to 96019872 11 + TSS region transcription start site region 95402
Tssr95403 10 96023969 to 96023980 11 + TSS region transcription start site region 95403
Tssr95404 10 96026704 to 96026723 19 + TSS region transcription start site region 95404
Tssr95405 10 96028427 to 96028439 12 + TSS region transcription start site region 95405
Tssr95406 10 96036667 to 96036683 16 + TSS region transcription start site region 95406
Tssr95407 10 96037418 to 96037453 35 + TSS region transcription start site region 95407
Tssr95408 10 96039572 to 96039583 11 + TSS region transcription start site region 95408
Tssr95409 10 96044519 to 96044529 10 + TSS region transcription start site region 95409
Gm49817 10 96047628 to 96096005 48377 - pseudogene predicted gene, 49817
Cpgi2146 10 96077528 to 96077679 151 CpG island CpG island 2146
Tssr99071 10 96077560 to 96077585 25 - TSS region transcription start site region 99071
Tssr99072 10 96077741 to 96077747 6 - TSS region transcription start site region 99072
Tssr99073 10 96077808 to 96077826 18 - TSS region transcription start site region 99073
Tssr99074 10 96077886 to 96077897 11 - TSS region transcription start site region 99074
Tssr95410 10 96094369 to 96094382 13 + TSS region transcription start site region 95410
D10Mit119 10 96106200 to 96106342 142 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 119
Gm48425 10 96127985 to 96129742 1757 - pseudogene predicted gene, 48425