Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:94515645-94935657

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmcc3 10 94311949 to 94590956 279007 + protein coding gene transmembrane and coiled coil domains 3
Cpgi2128 10 94514406 to 94515672 1266 CpG island CpG island 2128
D10Mit177 10 94528025 to 94528166 141 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 177
Tssr95330 10 94550819 to 94550833 14 + TSS region transcription start site region 95330
Tssr95331 10 94550865 to 94550876 11 + TSS region transcription start site region 95331
Tssr95332 10 94550914 to 94550934 20 + TSS region transcription start site region 95332
Tssr95333 10 94550945 to 94550962 17 + TSS region transcription start site region 95333
Tssr95334 10 94550965 to 94550976 11 + TSS region transcription start site region 95334
D10Mit309 10 94551781 to 94551914 133 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology-309
Tmcc3os 10 94567828 to 94612084 44256 - antisense lncRNA gene transmembrane and coiled coil domains 3, opposite strand
Tssr95335 10 94568128 to 94568144 16 + TSS region transcription start site region 95335
Tssr95336 10 94575108 to 94575119 11 + TSS region transcription start site region 95336
Tssr95337 10 94575272 to 94575295 23 + TSS region transcription start site region 95337
Tssr95338 10 94575305 to 94575325 20 + TSS region transcription start site region 95338
Tssr95339 10 94575339 to 94575352 13 + TSS region transcription start site region 95339
Tssr95340 10 94576217 to 94576220 3 + TSS region transcription start site region 95340
Tssr95341 10 94576254 to 94576270 16 + TSS region transcription start site region 95341
Mir7211 10 94586137 to 94586199 62 - miRNA gene microRNA 7211
Gm32898 10 94600050 to 94623704 23654 - lncRNA gene predicted gene, 32898
Gm48657 10 94620540 to 94648657 28117 + lincRNA gene predicted gene, 48657
Gm48658 10 94652796 to 94653052 256 - pseudogene predicted gene, 48658
Cep83os 10 94673493 to 94688613 15120 - bidirectional promoter lncRNA gene centrosomal protein 83, opposite strand
Gm49167 10 94685705 to 94688619 2914 + unclassified gene predicted gene, 49167
Cpgi2129 10 94688146 to 94689338 1192 CpG island CpG island 2129
Cep83 10 94688498 to 94790336 101838 + protein coding gene centrosomal protein 83
Tssr98994 10 94688555 to 94688612 57 - TSS region transcription start site region 98994
Tssr95342 10 94688619 to 94688641 22 + TSS region transcription start site region 95342
Tssr95343 10 94688647 to 94688682 35 + TSS region transcription start site region 95343
Tssr95344 10 94688739 to 94688808 69 + TSS region transcription start site region 95344
Tssr98995 10 94711144 to 94711145 1 - TSS region transcription start site region 98995
Tssr95345 10 94719693 to 94719717 24 + TSS region transcription start site region 95345
Tssr95346 10 94725645 to 94725657 12 + TSS region transcription start site region 95346
Tssr95347 10 94750340 to 94750374 34 + TSS region transcription start site region 95347
Gm48689 10 94781974 to 94787161 5187 - antisense lncRNA gene predicted gene, 48689
Plxnc1 10 94790866 to 94944835 153969 - protein coding gene plexin C1
Tssr98996 10 94792045 to 94792049 4 - TSS region transcription start site region 98996
B405C9T 10 94819229 to 94819470 241 DNA segment DNA segment, B405C9T
Gm24186 10 94821529 to 94821655 126 - rRNA gene predicted gene, 24186
Tssr98997 10 94829455 to 94829483 28 - TSS region transcription start site region 98997
Tssr98998 10 94829511 to 94829532 21 - TSS region transcription start site region 98998
Tssr95348 10 94846980 to 94846984 4 + TSS region transcription start site region 95348
Tssr98999 10 94855481 to 94855502 21 - TSS region transcription start site region 98999
Tssr99000 10 94855556 to 94855573 17 - TSS region transcription start site region 99000
Gm48718 10 94881311 to 94883792 2481 - unclassified gene predicted gene, 48718