Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:93558862-93694323

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc38 10 93540632 to 93584327 43695 + protein coding gene coiled-coil domain containing 38
Tssr95274 10 93578571 to 93578586 15 + TSS region transcription start site region 95274
Snrpf 10 93583029 to 93589658 6629 - protein coding gene small nuclear ribonucleoprotein polypeptide F
Cpgi2114 10 93589071 to 93589911 840 CpG island CpG island 2114
4933408J17Rik 10 93589413 to 93605245 15832 + lincRNA gene RIKEN cDNA 4933408J17 gene
Tssr98973 10 93589621 to 93589681 60 - TSS region transcription start site region 98973
Tssr3326 10 93589691 to 93589705 14 - TSS region transcription start site region 3326
Tssr98974 10 93594103 to 93594140 37 - TSS region transcription start site region 98974
Cpgi2115 10 93594138 to 93594565 427 CpG island CpG island 2115
Tssr95275 10 93595960 to 93596003 43 + TSS region transcription start site region 95275
Gm47156 10 93618862 to 93634323 15461 + lincRNA gene predicted gene, 47156
Cpgi2116 10 93640578 to 93642241 1663 CpG island CpG island 2116
Tssr95276 10 93640977 to 93641002 25 + TSS region transcription start site region 95276
Tssr95277 10 93641005 to 93641034 29 + TSS region transcription start site region 95277
Tssr95278 10 93641041 to 93641056 15 + TSS region transcription start site region 95278
Ntn4 10 93641049 to 93745972 104923 + protein coding gene netrin 4
Tssr95279 10 93641170 to 93641216 46 + TSS region transcription start site region 95279
Gm8580 10 93665383 to 93665846 463 - pseudogene predicted gene 8580
Gm15915 10 93674218 to 93683322 9104 - antisense lncRNA gene predicted gene 15915
Tssr95280 10 93678730 to 93678733 3 + TSS region transcription start site region 95280
Tssr95281 10 93682476 to 93682487 11 + TSS region transcription start site region 95281
Tssr98975 10 93683335 to 93683349 14 - TSS region transcription start site region 98975
Tssr95282 10 93691095 to 93691096 1 + TSS region transcription start site region 95282