Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:93530383-93800846

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Amdhd1 10 93523338 to 93540033 16695 - protein coding gene amidohydrolase domain containing 1
Cpgi2111 10 93534334 to 93534688 354 CpG island CpG island 2111
Cpgi2112 10 93539731 to 93540146 415 CpG island CpG island 2112
Tssr98970 10 93539935 to 93539948 13 - TSS region transcription start site region 98970
Tssr98971 10 93539971 to 93540014 43 - TSS region transcription start site region 98971
Tssr98972 10 93540016 to 93540027 11 - TSS region transcription start site region 98972
Cpgi2113 10 93540416 to 93540758 342 CpG island CpG island 2113
Tssr95269 10 93540605 to 93540614 9 + TSS region transcription start site region 95269
Tssr95270 10 93540626 to 93540653 27 + TSS region transcription start site region 95270
Ccdc38 10 93540632 to 93584327 43695 + protein coding gene coiled-coil domain containing 38
Tssr95271 10 93551829 to 93551830 1 + TSS region transcription start site region 95271
Tssr95272 10 93554862 to 93554866 4 + TSS region transcription start site region 95272
Tssr95273 10 93554878 to 93554886 8 + TSS region transcription start site region 95273
Tssr95274 10 93578571 to 93578586 15 + TSS region transcription start site region 95274
Snrpf 10 93583029 to 93589658 6629 - protein coding gene small nuclear ribonucleoprotein polypeptide F
Cpgi2114 10 93589071 to 93589911 840 CpG island CpG island 2114
4933408J17Rik 10 93589413 to 93605245 15832 + lincRNA gene RIKEN cDNA 4933408J17 gene
Tssr98973 10 93589621 to 93589681 60 - TSS region transcription start site region 98973
Tssr3326 10 93589691 to 93589705 14 - TSS region transcription start site region 3326
Tssr98974 10 93594103 to 93594140 37 - TSS region transcription start site region 98974
Cpgi2115 10 93594138 to 93594565 427 CpG island CpG island 2115
Tssr95275 10 93595960 to 93596003 43 + TSS region transcription start site region 95275
Gm47156 10 93618862 to 93634323 15461 + lincRNA gene predicted gene, 47156
Cpgi2116 10 93640578 to 93642241 1663 CpG island CpG island 2116
Tssr95276 10 93640977 to 93641002 25 + TSS region transcription start site region 95276
Tssr95277 10 93641005 to 93641034 29 + TSS region transcription start site region 95277
Tssr95278 10 93641041 to 93641056 15 + TSS region transcription start site region 95278
Ntn4 10 93641049 to 93745972 104923 + protein coding gene netrin 4
Tssr95279 10 93641170 to 93641216 46 + TSS region transcription start site region 95279
Gm8580 10 93665383 to 93665846 463 - pseudogene predicted gene 8580
Gm15915 10 93674218 to 93683322 9104 - antisense lncRNA gene predicted gene 15915
Tssr95280 10 93678730 to 93678733 3 + TSS region transcription start site region 95280
Tssr95281 10 93682476 to 93682487 11 + TSS region transcription start site region 95281
Tssr98975 10 93683335 to 93683349 14 - TSS region transcription start site region 98975
Tssr95282 10 93691095 to 93691096 1 + TSS region transcription start site region 95282
Tssr95283 10 93700685 to 93700708 23 + TSS region transcription start site region 95283
Gm15963 10 93726726 to 93728207 1481 - antisense lncRNA gene predicted gene 15963
Tssr95284 10 93778603 to 93778629 26 + TSS region transcription start site region 95284
Gm3571 10 93778660 to 93779719 1059 + pseudogene predicted gene 3571