Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:93247090-93547273

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdk17 10 93160876 to 93250688 89812 + protein coding gene cyclin-dependent kinase 17
Tssr98955 10 93247272 to 93247295 23 - TSS region transcription start site region 98955
Elk3 10 93247414 to 93311135 63721 - protein coding gene ELK3, member of ETS oncogene family
Tssr98956 10 93258426 to 93258429 3 - TSS region transcription start site region 98956
Tssr3321 10 93261492 to 93261504 12 + TSS region transcription start site region 3321
Tssr98957 10 93265124 to 93265189 65 - TSS region transcription start site region 98957
Tssr98958 10 93265834 to 93265876 42 - TSS region transcription start site region 98958
D10Mit43 10 93272950 to 93273087 137 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 43
Tssr98959 10 93276534 to 93276546 12 - TSS region transcription start site region 98959
Tssr98960 10 93276558 to 93276573 15 - TSS region transcription start site region 98960
Gm32551 10 93284984 to 93289465 4481 + lncRNA gene predicted gene, 32551
Tssr98961 10 93297833 to 93297839 6 - TSS region transcription start site region 98961
Tssr98962 10 93306110 to 93306112 2 - TSS region transcription start site region 98962
Tssr3322 10 93309082 to 93309102 20 - TSS region transcription start site region 3322
Tssr95255 10 93309710 to 93309724 14 + TSS region transcription start site region 95255
Tssr95256 10 93309885 to 93309891 6 + TSS region transcription start site region 95256
Tssr3323 10 93309904 to 93309924 20 + TSS region transcription start site region 3323
Tssr95257 10 93310023 to 93310064 41 + TSS region transcription start site region 95257
Cpgi2108 10 93310083 to 93311493 1410 CpG island CpG island 2108
Tssr98963 10 93310846 to 93310878 32 - TSS region transcription start site region 98963
Tssr98964 10 93310963 to 93310989 26 - TSS region transcription start site region 98964
Tssr98965 10 93310991 to 93311016 25 - TSS region transcription start site region 98965
Tssr98966 10 93311073 to 93311161 88 - TSS region transcription start site region 98966
Tssr98967 10 93311163 to 93311194 31 - TSS region transcription start site region 98967
Gm32688 10 93317403 to 93322725 5322 + lincRNA gene predicted gene, 32688
Tssr95258 10 93336220 to 93336239 19 + TSS region transcription start site region 95258
Gm17745 10 93336232 to 93348879 12647 + lincRNA gene predicted gene, 17745
Tssr98968 10 93380116 to 93380134 18 - TSS region transcription start site region 98968
Gm47344 10 93397090 to 93397273 183 - pseudogene predicted gene, 47344
Gm40742 10 93430285 to 93431959 1674 - lncRNA gene predicted gene, 40742
Cpgi2109 10 93430855 to 93431188 333 CpG island CpG island 2109
Mir7688 10 93433107 to 93433162 55 + miRNA gene microRNA 7688
Tssr3324 10 93437122 to 93437138 16 + TSS region transcription start site region 3324
n-TDgtc8 10 93452978 to 93453049 71 - tRNA gene nuclear encoded tRNA aspartic acid 8 (anticodon GTC)
Cpgi2110 10 93453054 to 93454039 985 CpG island CpG island 2110
Tssr95259 10 93453382 to 93453397 15 + TSS region transcription start site region 95259
Tssr95260 10 93453402 to 93453470 68 + TSS region transcription start site region 95260
Lta4h 10 93453411 to 93484875 31464 + protein coding gene leukotriene A4 hydrolase
Tssr95261 10 93453472 to 93453483 11 + TSS region transcription start site region 95261
Tssr95262 10 93468136 to 93468158 22 + TSS region transcription start site region 95262
Tssr95263 10 93488766 to 93488774 8 + TSS region transcription start site region 95263
Hal 10 93488768 to 93516761 27993 + protein coding gene histidine ammonia lyase
Tssr95264 10 93489059 to 93489076 17 + TSS region transcription start site region 95264
Tssr95265 10 93501656 to 93501683 27 + TSS region transcription start site region 95265
Tssr95266 10 93504333 to 93504342 9 + TSS region transcription start site region 95266
Tssr98969 10 93516576 to 93516582 6 - TSS region transcription start site region 98969
Tssr95267 10 93516925 to 93516945 20 + TSS region transcription start site region 95267
Tssr95268 10 93516966 to 93516971 5 + TSS region transcription start site region 95268
Tssr3325 10 93519056 to 93519058 2 - TSS region transcription start site region 3325
Amdhd1 10 93523338 to 93540033 16695 - protein coding gene amidohydrolase domain containing 1
Cpgi2111 10 93534334 to 93534688 354 CpG island CpG island 2111
Cpgi2112 10 93539731 to 93540146 415 CpG island CpG island 2112
Tssr98970 10 93539935 to 93539948 13 - TSS region transcription start site region 98970
Tssr98971 10 93539971 to 93540014 43 - TSS region transcription start site region 98971
Tssr98972 10 93540016 to 93540027 11 - TSS region transcription start site region 98972
Cpgi2113 10 93540416 to 93540758 342 CpG island CpG island 2113
Tssr95269 10 93540605 to 93540614 9 + TSS region transcription start site region 95269
Tssr95270 10 93540626 to 93540653 27 + TSS region transcription start site region 95270
Ccdc38 10 93540632 to 93584327 43695 + protein coding gene coiled-coil domain containing 38