Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:87491392-88341419

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200 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sysbp1 10 10232521 to 87565233 77332712 QTL systolic blood pressure 1
Ascl1 10 87491041 to 87493660 2619 - protein coding gene achaete-scute family bHLH transcription factor 1
Tssr98805 10 87491459 to 87491486 27 - TSS region transcription start site region 98805
Tssr98806 10 87491863 to 87491874 11 - TSS region transcription start site region 98806
Cpgi2074 10 87492237 to 87494169 1932 CpG island CpG island 2074
Tssr98807 10 87492482 to 87492493 11 - TSS region transcription start site region 98807
Tssr98808 10 87492759 to 87492771 12 - TSS region transcription start site region 98808
Tssr98809 10 87492796 to 87492834 38 - TSS region transcription start site region 98809
Tssr98810 10 87493651 to 87493666 15 - TSS region transcription start site region 98810
Cpgi2075 10 87494675 to 87494943 268 CpG island CpG island 2075
Gm29915 10 87502828 to 87508622 5794 - lncRNA gene predicted gene, 29915
Gm48120 10 87507862 to 87508485 623 + pseudogene predicted gene, 48120
Tssr95020 10 87518931 to 87518936 5 + TSS region transcription start site region 95020
Pah 10 87521795 to 87584136 62341 + protein coding gene phenylalanine hydroxylase
Tssr95021 10 87521893 to 87521917 24 + TSS region transcription start site region 95021
Tssr95022 10 87521920 to 87521937 17 + TSS region transcription start site region 95022
Tssr95023 10 87521954 to 87521977 23 + TSS region transcription start site region 95023
Tssr95024 10 87533366 to 87533391 25 + TSS region transcription start site region 95024
Tssr95025 10 87548978 to 87549005 27 + TSS region transcription start site region 95025
D10Mit118 10 87550455 to 87550595 140 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 118
Tssr95026 10 87562565 to 87562569 4 + TSS region transcription start site region 95026
D10Mit117 10 87565110 to 87565233 123 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 117
D10Mit229 10 87565376 to 87565523 147 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 229
Tssr95027 10 87566094 to 87566119 25 + TSS region transcription start site region 95027
2210420L05Rik 10 87571440 to 87571748 308 unclassified gene RIKEN cDNA 2210420L05 gene
Tssr95028 10 87573848 to 87573858 10 + TSS region transcription start site region 95028
Tssr95029 10 87581847 to 87581878 31 + TSS region transcription start site region 95029
Tssr95030 10 87679857 to 87679866 9 + TSS region transcription start site region 95030
Gm48195 10 87688578 to 87689029 451 + pseudogene predicted gene, 48195
D10Dcr10 10 87747862 to 87747957 95 DNA segment DNA Segment, Chr 10, Derry C. Roopenian 10
Tssr95031 10 87753809 to 87753856 47 + TSS region transcription start site region 95031
Gm20006 10 87759143 to 87759566 423 + pseudogene predicted gene, 20006
Gm30073 10 87777237 to 87798372 21135 - lncRNA gene predicted gene, 30073
Tssr98811 10 87809440 to 87809452 12 - TSS region transcription start site region 98811
Tssr98812 10 87809472 to 87809484 12 - TSS region transcription start site region 98812
Tssr95032 10 87817234 to 87817236 2 + TSS region transcription start site region 95032
Igf1os 10 87826377 to 87863381 37004 - antisense lncRNA gene insulin-like growth factor 1, opposite strand
n-TKctt21 10 87829886 to 87829958 72 - tRNA gene nuclear encoded tRNA lysine 21 (anticodon TTT)
Tssr98813 10 87830764 to 87830789 25 - TSS region transcription start site region 98813
Tssr95033 10 87830943 to 87830955 12 + TSS region transcription start site region 95033
Tssr95034 10 87853577 to 87853592 15 + TSS region transcription start site region 95034
Tssr95035 10 87858255 to 87858294 39 + TSS region transcription start site region 95035
Igf1 10 87858265 to 87937042 78777 + protein coding gene insulin-like growth factor 1
Tssr95036 10 87858602 to 87858620 18 + TSS region transcription start site region 95036
Tssr95037 10 87858639 to 87858649 10 + TSS region transcription start site region 95037
Tssr95038 10 87858656 to 87858665 9 + TSS region transcription start site region 95038
Tssr95039 10 87858681 to 87858695 14 + TSS region transcription start site region 95039
Tssr95040 10 87858816 to 87858832 16 + TSS region transcription start site region 95040
Tssr95041 10 87859046 to 87859057 11 + TSS region transcription start site region 95041
Tssr95042 10 87859062 to 87859094 32 + TSS region transcription start site region 95042
Tssr95043 10 87859107 to 87859126 19 + TSS region transcription start site region 95043
Tssr95044 10 87859158 to 87859178 20 + TSS region transcription start site region 95044
Tssr95045 10 87859180 to 87859195 15 + TSS region transcription start site region 95045
Tssr95046 10 87859199 to 87859216 17 + TSS region transcription start site region 95046
Tssr95047 10 87859233 to 87859244 11 + TSS region transcription start site region 95047
Tssr95048 10 87859255 to 87859266 11 + TSS region transcription start site region 95048
Tssr95049 10 87859279 to 87859288 9 + TSS region transcription start site region 95049
Tssr95050 10 87859291 to 87859302 11 + TSS region transcription start site region 95050
Tssr95051 10 87859310 to 87859334 24 + TSS region transcription start site region 95051
Tssr95052 10 87859335 to 87859336 1 + TSS region transcription start site region 95052
Tssr95053 10 87859356 to 87859367 11 + TSS region transcription start site region 95053
Tssr95054 10 87859372 to 87859387 15 + TSS region transcription start site region 95054
Tssr95055 10 87859481 to 87859492 11 + TSS region transcription start site region 95055
Tssr95056 10 87859535 to 87859572 37 + TSS region transcription start site region 95056
Tssr95057 10 87859593 to 87859612 19 + TSS region transcription start site region 95057
Tssr95058 10 87859636 to 87859647 11 + TSS region transcription start site region 95058
Tssr95059 10 87859698 to 87859707 9 + TSS region transcription start site region 95059
Tssr95060 10 87860062 to 87860086 24 + TSS region transcription start site region 95060
Tssr95061 10 87860144 to 87860159 15 + TSS region transcription start site region 95061
Tssr95062 10 87860166 to 87860179 13 + TSS region transcription start site region 95062
Cpgi2076 10 87860173 to 87860357 184 CpG island CpG island 2076
Tssr98814 10 87860200 to 87860202 2 - TSS region transcription start site region 98814
Tssr95063 10 87860221 to 87860240 19 + TSS region transcription start site region 95063
Tssr95064 10 87860249 to 87860267 18 + TSS region transcription start site region 95064
Tssr98815 10 87860355 to 87860365 10 - TSS region transcription start site region 98815
Tssr95065 10 87860437 to 87860464 27 + TSS region transcription start site region 95065
Tssr95066 10 87860477 to 87860492 15 + TSS region transcription start site region 95066
Tssr95067 10 87860824 to 87860830 6 + TSS region transcription start site region 95067
Tssr95068 10 87861006 to 87861031 25 + TSS region transcription start site region 95068
Tssr95069 10 87861077 to 87861109 32 + TSS region transcription start site region 95069
Tssr95070 10 87861295 to 87861306 11 + TSS region transcription start site region 95070
Tssr95071 10 87861309 to 87861338 29 + TSS region transcription start site region 95071
Tssr95072 10 87863784 to 87863798 14 + TSS region transcription start site region 95072
Tssr95073 10 87864028 to 87864069 41 + TSS region transcription start site region 95073
Tssr95074 10 87864329 to 87864369 40 + TSS region transcription start site region 95074
Tssr95075 10 87864722 to 87864861 139 + TSS region transcription start site region 95075
Tssr95076 10 87864871 to 87864902 31 + TSS region transcription start site region 95076
Tssr95077 10 87865020 to 87865037 17 + TSS region transcription start site region 95077
Tssr95078 10 87871936 to 87871949 13 + TSS region transcription start site region 95078
Tssr95079 10 87880814 to 87880825 11 + TSS region transcription start site region 95079
Tssr95080 10 87880943 to 87880956 13 + TSS region transcription start site region 95080
Tssr95081 10 87892414 to 87892416 2 + TSS region transcription start site region 95081
Tssr95082 10 87892465 to 87892487 22 + TSS region transcription start site region 95082
Tssr95083 10 87892494 to 87892513 19 + TSS region transcription start site region 95083
Tssr95084 10 87892585 to 87892614 29 + TSS region transcription start site region 95084
Tssr95085 10 87903966 to 87903991 25 + TSS region transcription start site region 95085
Tssr95086 10 87906921 to 87906935 14 + TSS region transcription start site region 95086
Tssr95087 10 87907965 to 87907977 12 + TSS region transcription start site region 95087
Tssr95088 10 87913605 to 87913622 17 + TSS region transcription start site region 95088
Tssr95089 10 87913626 to 87913639 13 + TSS region transcription start site region 95089
Tssr95090 10 87913648 to 87913662 14 + TSS region transcription start site region 95090
Tssr95091 10 87913664 to 87913684 20 + TSS region transcription start site region 95091
Tssr95092 10 87913691 to 87913702 11 + TSS region transcription start site region 95092
Tssr95093 10 87913704 to 87913736 32 + TSS region transcription start site region 95093
Tssr95094 10 87913747 to 87913761 14 + TSS region transcription start site region 95094
Tssr95095 10 87913766 to 87913769 3 + TSS region transcription start site region 95095
Tssr95096 10 87914376 to 87914387 11 + TSS region transcription start site region 95096
Tssr95097 10 87914392 to 87914413 21 + TSS region transcription start site region 95097
Tssr95098 10 87914524 to 87914539 15 + TSS region transcription start site region 95098
Tssr95099 10 87915287 to 87915313 26 + TSS region transcription start site region 95099
Tssr98816 10 87915321 to 87915354 33 - TSS region transcription start site region 98816
Tssr95100 10 87916301 to 87916308 7 + TSS region transcription start site region 95100
Tssr95101 10 87916358 to 87916376 18 + TSS region transcription start site region 95101
Tssr95102 10 87916392 to 87916419 27 + TSS region transcription start site region 95102
Tssr95103 10 87916427 to 87916438 11 + TSS region transcription start site region 95103
Tssr95104 10 87916476 to 87916507 31 + TSS region transcription start site region 95104
Tssr95105 10 87921595 to 87921599 4 + TSS region transcription start site region 95105
Tssr95106 10 87923227 to 87923267 40 + TSS region transcription start site region 95106
Tssr95107 10 87925262 to 87925266 4 + TSS region transcription start site region 95107
Tssr95108 10 87926396 to 87926405 9 + TSS region transcription start site region 95108
Tssr95109 10 87929095 to 87929145 50 + TSS region transcription start site region 95109
Tssr95110 10 87929242 to 87929256 14 + TSS region transcription start site region 95110
Tssr95111 10 87930687 to 87930697 10 + TSS region transcription start site region 95111
Tssr98817 10 87930700 to 87930723 23 - TSS region transcription start site region 98817
Tssr95112 10 87930729 to 87930808 79 + TSS region transcription start site region 95112
Tssr98818 10 87930805 to 87930841 36 - TSS region transcription start site region 98818
Tssr95113 10 87930855 to 87930872 17 + TSS region transcription start site region 95113
Tssr98819 10 87930860 to 87930871 11 - TSS region transcription start site region 98819
Tssr95114 10 87930952 to 87930965 13 + TSS region transcription start site region 95114
Tssr95115 10 87931140 to 87931169 29 + TSS region transcription start site region 95115
Tssr95116 10 87931301 to 87931331 30 + TSS region transcription start site region 95116
Tssr95117 10 87931342 to 87931354 12 + TSS region transcription start site region 95117
Tssr95118 10 87931453 to 87931464 11 + TSS region transcription start site region 95118
Tssr95119 10 87931478 to 87931489 11 + TSS region transcription start site region 95119
Tssr95120 10 87931574 to 87931585 11 + TSS region transcription start site region 95120
Tssr95121 10 87932072 to 87932084 12 + TSS region transcription start site region 95121
Tssr95122 10 87932426 to 87932441 15 + TSS region transcription start site region 95122
Tssr95123 10 87932776 to 87932788 12 + TSS region transcription start site region 95123
Tssr95124 10 87932801 to 87932819 18 + TSS region transcription start site region 95124
Tssr95125 10 87933197 to 87933209 12 + TSS region transcription start site region 95125
Tssr95126 10 87933235 to 87933296 61 + TSS region transcription start site region 95126
Tssr95127 10 87933332 to 87933371 39 + TSS region transcription start site region 95127
Tssr95128 10 87933374 to 87933393 19 + TSS region transcription start site region 95128
Tssr95129 10 87933709 to 87933725 16 + TSS region transcription start site region 95129
Tssr95130 10 87933837 to 87933848 11 + TSS region transcription start site region 95130
Tssr95131 10 87934007 to 87934045 38 + TSS region transcription start site region 95131
Tssr95132 10 87934669 to 87934686 17 + TSS region transcription start site region 95132
Tssr95133 10 87934820 to 87934850 30 + TSS region transcription start site region 95133
Tssr95134 10 87935208 to 87935217 9 + TSS region transcription start site region 95134
Tssr95135 10 87935907 to 87935930 23 + TSS region transcription start site region 95135
Tssr95136 10 87935953 to 87935994 41 + TSS region transcription start site region 95136
Tssr95137 10 87936089 to 87936100 11 + TSS region transcription start site region 95137
Tssr95138 10 87937725 to 87937733 8 + TSS region transcription start site region 95138
Tssr98820 10 87957586 to 87957588 2 - TSS region transcription start site region 98820
Tyms-ps 10 87966847 to 87967761 914 + pseudogene thymidylate synthase, pseudogene
Gm48306 10 87980462 to 87984220 3758 + lincRNA gene predicted gene, 48306
Gm10763 10 88038224 to 88039678 1454 unclassified gene predicted gene 10763
Gm48307 10 88038225 to 88039679 1454 + unclassified gene predicted gene, 48307
Gm30233 10 88068073 to 88090347 22274 - lncRNA gene predicted gene, 30233
Gm48308 10 88088198 to 88089824 1626 + unclassified gene predicted gene, 48308
Tssr95139 10 88091070 to 88091076 6 + TSS region transcription start site region 95139
Pmch 10 88091072 to 88092374 1302 + protein coding gene pro-melanin-concentrating hormone
Parpbp 10 88091432 to 88146941 55509 - protein coding gene PARP1 binding protein
Gm6653 10 88134566 to 88135853 1287 - unclassified gene predicted gene 6653
Tssr98821 10 88135779 to 88135786 7 - TSS region transcription start site region 98821
Tssr98822 10 88135807 to 88135819 12 - TSS region transcription start site region 98822
Tssr98823 10 88135824 to 88135829 5 - TSS region transcription start site region 98823
Tssr98824 10 88135836 to 88135862 26 - TSS region transcription start site region 98824
Tssr95140 10 88135902 to 88135924 22 + TSS region transcription start site region 95140
4921515L22Rik 10 88135919 to 88137531 1612 + antisense lncRNA gene RIKEN cDNA 4921515L22 gene
Tssr95141 10 88135927 to 88135930 3 + TSS region transcription start site region 95141
Cpgi2077 10 88146557 to 88147352 795 CpG island CpG island 2077
Tssr98825 10 88146804 to 88146820 16 - TSS region transcription start site region 98825
Tssr98826 10 88146867 to 88146936 69 - TSS region transcription start site region 98826
Nup37 10 88146992 to 88178390 31398 + protein coding gene nucleoporin 37
Tssr95142 10 88146995 to 88147037 42 + TSS region transcription start site region 95142
Tssr95143 10 88147040 to 88147053 13 + TSS region transcription start site region 95143
Tssr95144 10 88147054 to 88147059 5 + TSS region transcription start site region 95144
Tssr95145 10 88147061 to 88147076 15 + TSS region transcription start site region 95145
Tssr95146 10 88162184 to 88162185 1 + TSS region transcription start site region 95146
Gm26357 10 88164959 to 88165073 114 - snRNA gene predicted gene, 26357
D10Mit94 10 88180636 to 88180785 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 94
Tssr95147 10 88201087 to 88201116 29 + TSS region transcription start site region 95147
Washc3 10 88201093 to 88246158 45065 + protein coding gene WASH complex subunit 3
Tssr95148 10 88201117 to 88201156 39 + TSS region transcription start site region 95148
Cpgi2078 10 88201124 to 88201320 196 CpG island CpG island 2078
Tssr95149 10 88201158 to 88201218 60 + TSS region transcription start site region 95149
Tssr95150 10 88201223 to 88201232 9 + TSS region transcription start site region 95150
Tssr95151 10 88204475 to 88204491 16 + TSS region transcription start site region 95151
Tssr3308 10 88224750 to 88224753 3 + TSS region transcription start site region 3308
Gm8415 10 88247418 to 88248635 1217 + pseudogene predicted gene 8415
Gm17980 10 88270883 to 88273231 2348 - pseudogene predicted gene, 17980
Gm48476 10 88309813 to 88310132 319 - pseudogene predicted gene, 48476
Dram1 10 88322801 to 88364383 41582 - protein coding gene DNA-damage regulated autophagy modulator 1
Tssr98827 10 88323130 to 88323151 21 - TSS region transcription start site region 98827
Tssr98828 10 88336164 to 88336189 25 - TSS region transcription start site region 98828
Cpgi2079 10 88336752 to 88337034 282 CpG island CpG island 2079
Tssr98829 10 88338627 to 88338630 3 - TSS region transcription start site region 98829
Tssr98830 10 88338668 to 88338681 13 - TSS region transcription start site region 98830
Igf1sl2 10 100100416 to 87858265 -12242151 QTL IGF-1 serum levels 2