Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:86704094-87009954

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hsp90b1 10 86690841 to 86705444 14603 - protein coding gene heat shock protein 90, beta (Grp94), member 1
Tssr95005 10 86704281 to 86704300 19 + TSS region transcription start site region 95005
Tssr98788 10 86704327 to 86704353 26 - TSS region transcription start site region 98788
Cpgi2068 10 86704756 to 86706476 1720 CpG island CpG island 2068
Gm25745 10 86705316 to 86705448 132 - miRNA gene predicted gene, 25745
Tssr98789 10 86705387 to 86705398 11 - TSS region transcription start site region 98789
Tssr98790 10 86705453 to 86705471 18 - TSS region transcription start site region 98790
Tssr98791 10 86705485 to 86705492 7 - TSS region transcription start site region 98791
Ttc41 10 86705811 to 86776844 71033 + protein coding gene tetratricopeptide repeat domain 41
Tssr95006 10 86705856 to 86705878 22 + TSS region transcription start site region 95006
Tssr95007 10 86705883 to 86705892 9 + TSS region transcription start site region 95007
Cpgi2069 10 86730770 to 86731125 355 CpG island CpG island 2069
Tssr95008 10 86731753 to 86731756 3 + TSS region transcription start site region 95008
Fabp3-ps1 10 86731987 to 86732388 401 - pseudogene fatty acid binding protein 3, muscle and heart, pseudogene 1
Tssr98792 10 86732418 to 86732429 11 - TSS region transcription start site region 98792
Gm49358 10 86763972 to 86833972 70000 + protein coding gene predicted gene, 49358
Cpgi2070 10 86778379 to 86779786 1407 CpG island CpG island 2070
Tssr98793 10 86778495 to 86778540 45 - TSS region transcription start site region 98793
Tssr95009 10 86779000 to 86779009 9 + TSS region transcription start site region 95009
Nt5dc3 10 86779005 to 86838389 59384 + protein coding gene 5'-nucleotidase domain containing 3
Tssr95010 10 86779019 to 86779044 25 + TSS region transcription start site region 95010
Tssr95011 10 86779046 to 86779068 22 + TSS region transcription start site region 95011
Tssr95012 10 86779075 to 86779095 20 + TSS region transcription start site region 95012
Tssr95013 10 86779097 to 86779104 7 + TSS region transcription start site region 95013
Gm16268 10 86839094 to 86874954 35860 + antisense lncRNA gene predicted gene 16268
Stab2 10 86841210 to 87007942 166732 - protein coding gene stabilin 2
Tssr95014 10 86874323 to 86874367 44 + TSS region transcription start site region 95014
Tssr98794 10 86885746 to 86885768 22 - TSS region transcription start site region 98794
Tssr98795 10 86885780 to 86885803 23 - TSS region transcription start site region 98795
Tssr98796 10 86885813 to 86885832 19 - TSS region transcription start site region 98796
Tssr98797 10 86885841 to 86885852 11 - TSS region transcription start site region 98797
Cpgi2071 10 86908656 to 86909199 543 CpG island CpG island 2071
Tssr95015 10 86908716 to 86908726 10 + TSS region transcription start site region 95015
Gm16280 10 86908761 to 86910013 1252 + antisense lncRNA gene predicted gene 16280
Gm16270 10 86909479 to 86912716 3237 + pseudogene predicted gene 16270
Gm16271 10 86972216 to 87028015 55799 + antisense lncRNA gene predicted gene 16271
Gm16269 10 87000297 to 87000705 408 + pseudogene predicted gene 16269
Tssr98798 10 87007922 to 87007950 28 - TSS region transcription start site region 98798
Tssr98799 10 87008015 to 87008031 16 - TSS region transcription start site region 98799